RNA–Protein interactions for RNA: ENST00000579451.1

PSMD11-208, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-208	ENST00000579451	GGN	Q86UU5	652 aa		13.62	□□□□□ -0.23
PSMD11-208	ENST00000579451	FAM76A	Q8TAV0	307 aa		13.62	□□□□□ -0.23
PSMD11-208	ENST00000579451	AMDHD1	Q96NU7	426 aa		13.62	□□□□□ -0.23
PSMD11-208	ENST00000579451	TBL1XR1	Q9BZK7	514 aa		13.62	□□□□□ -0.23
PSMD11-208	ENST00000579451	KLHL4	Q9C0H6	718 aa		13.62	□□□□□ -0.23
PSMD11-208	ENST00000579451	C3orf14	Q9HBI5	128 aa		13.62	□□□□□ -0.23
PSMD11-208	ENST00000579451	PLSCR4	Q9NRQ2	329 aa		13.62	□□□□□ -0.23
PSMD11-208	ENST00000579451	POLR3H	Q9Y535	204 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD11-208	ENST00000579451	JMJD1C	Q15652	2540 aa		13.62	□□□□□ -0.23
PSMD11-208	ENST00000579451	FREM1	Q5H8C1	2179 aa		13.62	□□□□□ -0.23
PSMD11-208	ENST00000579451	TTC36	A6NLP5	189 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	UBFD1	O14562	309 aa	Known RBP	13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	UTS2	O95399	124 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	GSTA1	P08263	222 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	RFX3	P48380	749 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	GLE1	Q53GS7	698 aa	Known RBP	13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	ANKRD34A	Q69YU3	496 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	APOOL	Q6UXV4	268 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	IKBIP	Q70UQ0	350 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	TRIM46	Q7Z4K8	759 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	OR6K3	Q8NGY3	331 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	ACMSD	Q8TDX5	336 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	GSX2	Q9BZM3	304 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	STOML1	Q9UBI4	398 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	EMC9	Q9Y3B6	208 aa		13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	CHD3	Q12873	2000 aa	Known RBP	13.61	□□□□□ -0.23
PSMD11-208	ENST00000579451	TRIM64	A6NGJ6	449 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	TRIM64B	A6NI03	449 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	SHISA8	B8ZZ34	492 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	GOLGA8R	I6L899	631 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	EIF1AY	O14602	144 aa	Known RBP	13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	SMAD7	O15105	426 aa	Known RBP	13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	KLF4	O43474	513 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	RSL1D1	O76021	490 aa	Known RBP	13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	KCNH1	O95259	989 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	IGKV1D-16	P01601	117 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	THBD	P07204	575 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	PPP3CB	P16298	524 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	ZNF17	P17021	662 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	IL11	P20809	199 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	GABRA3	P34903	492 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	EIF1AX	P47813	144 aa	Known RBP	13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	EXOC3L2	Q2M3D2	409 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	GRAMD1B	Q3KR37	738 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	BEX5	Q5H9J7	111 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	NOXRED1	Q6NXP6	359 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	PLEKHM3	Q6ZWE6	761 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	PRIMA1	Q86XR5	153 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	CCNYL1	Q8N7R7	359 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	IGFBPL1	Q8WX77	278 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	HOXB13	Q92826	284 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	CCDC126	Q96EE4	140 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	C16orf45	Q96MC5	204 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	PRRG4	Q9BZD6	226 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	DCDC2	Q9UHG0	476 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	VDAC3	Q9Y277	283 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	HIVEP2	P31629	2446 aa		13.6	□□□□□ -0.23
PSMD11-208	ENST00000579451	USF3	Q68DE3	2245 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	NUP214	P35658	2090 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	UQCRHL	A0A096LP55	91 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	GXYLT2	A0PJZ3	443 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451		H3BQF6	201 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	RIPK2	O43353	540 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	GMFG	O60234	142 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	SS18L1	O75177	396 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	PLG	P00747	810 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	PYGB	P11216	843 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	PRPS2	P11908	318 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	PAX1	P15863	534 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	MAP3K8	P41279	467 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	SLC6A8	P48029	635 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	PTH2R	P49190	550 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	NAA20	P61599	178 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	PPP4R4	Q6NUP7	873 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	STAC2	Q6ZMT1	411 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	ZNF551	Q7Z340	670 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	MNS1	Q8NEH6	495 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	GPR151	Q8TDV0	419 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	PIK3R3	Q92569	461 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	METTL2A	Q96IZ6	378 aa	Known RBP	13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	ADGRG7	Q96K78	797 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	EGLN2	Q96KS0	407 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	HHATL	Q9HCP6	504 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	EMCN	Q9ULC0	261 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	RTTN	Q86VV8	2226 aa		13.59	□□□□□ -0.23
PSMD11-208	ENST00000579451	CSPG4	Q6UVK1	2322 aa		13.58	□□□□□ -0.23
PSMD11-208	ENST00000579451	CR1	P17927	2039 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451		A0A087WZY1	265 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	ALG1L2	C9J202	215 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451		G3V2L1	256 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	NKX2-2	O95096	273 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	CNOT4	O95628	575 aa	Known RBP	13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	NGFR	P08138	427 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	MYL2	P10916	166 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms