RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 THSD7AQ9UPZ6 1657 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 RIC1Q4ADV7 1423 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 A0A0A6YYC8 382 aaPredicted RBP3.97□□□□□ -1.77
NUP88-213ENST00000576862 FAM149AA5PLN7 773 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 I3L1I5 382 aaPredicted RBP3.97□□□□□ -1.77
NUP88-213ENST00000576862 RANBP6O60518 1105 aaKnown RBP3.97□□□□□ -1.77
NUP88-213ENST00000576862 OR9G9P0C7N8 305 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 DNAJB1P25685 340 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 ADORA1P30542 326 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 MATKP42679 507 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 VCPP55072 806 aaKnown RBP3.97□□□□□ -1.77
NUP88-213ENST00000576862 CASP9P55211 416 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 NUCB2P80303 420 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 PRKCEQ02156 737 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 GIT2Q14161 759 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 RCN2Q14257 317 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 CCDC57Q2TAC2 916 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 RNF212Q495C1 297 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 RIPPLY2Q5TAB7 128 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 ARMCX5Q6P1M9 558 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 METAP1DQ6UB28 335 aaPredicted RBP3.97□□□□□ -1.77
NUP88-213ENST00000576862 CWC27Q6UX04 472 aaKnown RBP3.97□□□□□ -1.77
NUP88-213ENST00000576862 BAIAP2L2Q6UXY1 529 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 CNTN4Q8IWV2 1026 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 THEM5Q8N1Q8 247 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 TRIML2Q8N7C3 387 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 OR52M1Q8NGK5 317 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 RHOXF1Q8NHV9 184 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 FLVCR1-AS1Q8TAF5 88 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 MRPL24Q96A35 216 aaKnown RBP3.97□□□□□ -1.77
NUP88-213ENST00000576862 ULK4Q96C45 1275 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 NAP1L3Q99457 506 aaPredicted RBP3.97□□□□□ -1.77
NUP88-213ENST00000576862 CCDC77Q9BR77 488 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 CACNG6Q9BXT2 260 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 BOLA2Q9H3K6 86 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 RIBC2Q9H4K1 309 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 CYP39A1Q9NYL5 469 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 DHRS4-AS1Q9P1J3 65 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 RPH3AQ9Y2J0 694 aaPredicted RBP3.97□□□□□ -1.77
NUP88-213ENST00000576862 CLCA3PQ9Y6N3 262 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 V9GYY5 206 aaPredicted RBP3.97□□□□□ -1.77
NUP88-213ENST00000576862 LAMB4A4D0S4 1761 aa3.97□□□□□ -1.77
NUP88-213ENST00000576862 N4BP2Q86UW6 1770 aaPredicted RBP3.97□□□□□ -1.77
NUP88-213ENST00000576862 SH3TC1Q8TE82 1336 aa3.96□□□□□ -1.77
NUP88-213ENST00000576862 RAD50Q92878 1312 aa3.96□□□□□ -1.77
NUP88-213ENST00000576862 ZNF609O15014 1411 aa3.96□□□□□ -1.77
NUP88-213ENST00000576862 NWD2Q9ULI1 1742 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 A0A0D9SFI3 127 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 A0A1B0GUL7 405 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 C13orf42A0A1B0GVH6 325 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 FOXI3A8MTJ6 420 aaPredicted RBP3.96□□□□□ -1.78
NUP88-213ENST00000576862 E2F3O00716 465 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 MAPK13O15264 365 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 GMFGO60234 142 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 ZNF253O75346 499 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 CPNE6O95741 557 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 EPOP01588 193 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 KRT8P05787 483 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 NUDT17P0C025 328 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 GHRP10912 638 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 EZRP15311 586 aaKnown RBP3.96□□□□□ -1.78
NUP88-213ENST00000576862 FOSL2P15408 326 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 GLRA2P23416 452 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 MDH1P40925 334 aaKnown RBP3.96□□□□□ -1.78
NUP88-213ENST00000576862 TNFSF10P50591 281 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 AP3M2P53677 418 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 TIMM10P62072 90 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 ELP6Q0PNE2 266 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 DOC2AQ14183 400 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 PDK1Q15118 436 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 HADHQ16836 314 aaKnown RBP3.96□□□□□ -1.78
NUP88-213ENST00000576862 Q1RN00 199 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 WDR25Q64LD2 544 aaPredicted RBP3.96□□□□□ -1.78
NUP88-213ENST00000576862 C6orf89Q6UWU4 347 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 RBM43Q6ZSC3 357 aaKnown RBP3.96□□□□□ -1.78
NUP88-213ENST00000576862 TAS2R42Q7RTR8 314 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 C17orf64Q86WR6 236 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 C11orf53Q8IXP5 236 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 GVQW1Q8N7I0 195 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 ZNF491Q8N8L2 437 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 KLHL30-AS1Q8NEE0 82 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 OR13C2Q8NGS9 318 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 PNPLA2Q96AD5 504 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 DTNBP1Q96EV8 351 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 C14orf79Q96F83 325 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 PIWIL1Q96J94 861 aaKnown RBP3.96□□□□□ -1.78
NUP88-213ENST00000576862 S1PR3Q99500 378 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 PLIN2Q99541 437 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 BCL7BQ9BQE9 202 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 SLC5A7Q9GZV3 580 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 WWP1Q9H0M0 922 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 MED4Q9NPJ6 270 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 PNPLA3Q9NST1 481 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 UBAP1Q9NZ09 502 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 NARFQ9UHQ1 456 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 CCPG1Q9ULG6 757 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 GMEB1Q9Y692 573 aa3.96□□□□□ -1.78
NUP88-213ENST00000576862 DDX49Q9Y6V7 483 aaKnown RBP3.96□□□□□ -1.78
NUP88-213ENST00000576862 TJP1Q07157 1748 aa3.95□□□□□ -1.78
NUP88-213ENST00000576862 RTL9Q8NET4 1388 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms