RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 GALNT9Q9HCQ5 603 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 ZCCHC3Q9NUD5 404 aaKnown RBP8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 TAS2R9Q9NYW1 312 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 PRR13Q9NZ81 148 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 PRODH2Q9UF12 536 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 LIPGQ9Y5X9 500 aa8.66□□□□□ -1.02
NPLOC4-219ENST00000576713 A0A0G2JND7 137 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 PRSS51A0A1B0GVH4 220 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CLEC18AA5D8T8 446 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 ANKRD34BA5PLL1 514 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 FAM166BA8MTA8 275 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 RNASET2O00584 256 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 ACOX3O15254 700 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 POLR3GO15318 223 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 HS6ST1O60243 411 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 ICOSLGO75144 302 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 COQ9O75208 318 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 TRIM3O75382 744 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 SLC22A3O75751 556 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 BCAS2O75934 225 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CPSF4O95639 269 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 RNF224P0DH78 156 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CYP4B1P13584 511 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 HOXB9P17482 250 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CAPN3P20807 821 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CNR1P21554 472 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 S100A3P33764 101 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 GABRA3P34903 492 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 SOAT1P35610 550 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CCT3P49368 545 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 MRPL19P49406 292 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 SEC24CP53992 1094 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 GAS1P54826 345 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 KCNK10P57789 538 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 FUT5Q11128 374 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 TP53BP2Q13625 1128 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 LASP1Q14847 261 aaKnown RBP8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 INAQ16352 499 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 GSTA3Q16772 222 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 TIGD2Q4W5G0 525 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CMPK2Q5EBM0 449 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CCNJQ5T5M9 372 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 FAM180AQ6UWF9 173 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CLEC18BQ6UXF7 455 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 APOOLQ6UXV4 268 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 TAGAPQ8N103 731 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 ARFGAP2Q8N6H7 521 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 HORMAD2Q8N7B1 307 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 BCORP1Q8N888 145 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CLEC18CQ8NCF0 446 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 OR4A15Q8NGL6 344 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 SLC9A6Q92581 669 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 DIO2Q92813 273 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CDS1Q92903 461 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 UBE2FQ969M7 185 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 TMEM125Q96AQ2 219 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 HSPBAP1Q96EW2 488 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 MISP3Q96FF7 219 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 SLC35A4Q96G79 324 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 HRASLS5Q96KN8 279 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 SGCZQ96LD1 299 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 RILPQ96NA2 401 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CCDC115Q96NT0 180 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 MS4A4EQ96PG1 132 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 TMEM120AQ9BXJ8 343 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 TTTY12Q9BZ98 90 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 SACM1LQ9NTJ5 587 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 OLAHQ9NV23 265 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 ATAD3AQ9NVI7 634 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 GFOD1Q9NXC2 390 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 ZIM2Q9NZV7 527 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 CFL2Q9Y281 166 aa8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 KLF13Q9Y2Y9 288 aaPredicted RBP8.65□□□□□ -1.02
NPLOC4-219ENST00000576713 NCKAP5O14513 1909 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 NBASA2RRP1 2371 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 CENPVL1A0A0U1RR11 272 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 RNF103-CHMP3A0A140T963 221 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 OR6C70A6NIJ9 312 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 KIAA1324LA8MWY0 1029 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 NPIPA5E9PKD4 350 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 CFLARO15519 480 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 SUSD5O60279 629 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 FADS1O60427 444 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 REM1O75628 298 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 VIMP08670 466 aaKnown RBP8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 MAGEA5P43359 124 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 POLR2JP52435 117 aaKnown RBP8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 MVDP53602 400 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 CLNS1AP54105 237 aaKnown RBP8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 DCAF7P61962 342 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 MRPS22P82650 360 aaKnown RBP8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 EIF2S3LQ2VIR3 472 aaKnown RBP8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 PAGE3Q5JUK9 113 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 SLC22A10Q63ZE4 541 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 CDC73Q6P1J9 531 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 SLC2A7Q6PXP3 512 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 C6orf120Q7Z4R8 191 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 TSPYL5Q86VY4 417 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 MSRB3Q8IXL7 192 aa8.64□□□□□ -1.03
NPLOC4-219ENST00000576713 C10orf111Q8N326 155 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms