RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ICMTO60725 284 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 LDB3O75112 727 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 CXCR1P25024 350 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 RAB40BQ12829 278 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 RAB33AQ14088 237 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 ACSM5Q6NUN0 579 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 GPALPP1Q8IXQ4 340 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 LRRC25Q8N386 305 aaPredicted RBP16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 YIPF6Q96EC8 236 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 FOXN4Q96NZ1 517 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 POLDIP3Q9BY77 421 aaKnown RBP16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 PLEKHA1Q9HB21 404 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 HRASLS2Q9NWW9 162 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 SLC39A1Q9NY26 324 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 NDRG2Q9UN36 371 aaKnown RBP16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 PADI2Q9Y2J8 665 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 H0YIV9 168 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 AGR2O95994 175 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 ELAVL4P26378 380 aaKnown RBP16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 UGT2B10P36537 528 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 BTN1A1Q13410 526 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 EFR3AQ14156 821 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 IHHQ14623 411 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 GRK1Q15835 563 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 SYT9Q86SS6 491 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 SLAIN1Q8ND83 568 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 OR52D1Q9H346 318 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 PDFQ9HBH1 243 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 Q9N2J8 555 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 MARCH5Q9NX47 278 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 UPB1Q9UBR1 384 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 NHSQ6T4R5 1651 aa16.83■□□□□ 0.28
ATPAF1-214ENST00000576409 PRSS23O95084 383 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 SLC1A3P43003 542 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 HTR3AP46098 478 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 OR3A3P47888 321 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 OR3A2P47893 321 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 AFMIDQ63HM1 303 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 REM2Q8IYK8 340 aaPredicted RBP16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 GALNT11Q8NCW6 608 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 KATNBL1Q9H079 304 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 ATG5Q9H1Y0 275 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 METTL17Q9H7H0 456 aaPredicted RBP16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 KCMF1Q9P0J7 381 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 POLR1CO15160 346 aaPredicted RBP16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 PLGP00747 810 aaPredicted RBP16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 PRH1P02810 166 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 SPARCP09486 303 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 ADRB3P13945 408 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 MMP11P24347 488 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 SRP9P49458 86 aaKnown RBP16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 E2F1Q01094 437 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 GAREM2Q75VX8 874 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 VASH1Q7L8A9 365 aaPredicted RBP16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 KIF18BQ86Y91 864 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 OR56A3Q8NH54 315 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 METTL21AQ8WXB1 218 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 CDS1Q92903 461 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 A0A0X1KG70 313 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 SCO1O75880 301 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 SYN1P17600 705 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 RAB28P51157 221 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 SHC2P98077 582 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 LRFN4Q6PJG9 635 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 OR2L3Q8NG85 312 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 OR52I1Q8NGK6 324 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 SMPDL3BQ92485 455 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 SLC22A18Q96BI1 424 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 TBL1XR1Q9BZK7 514 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 CDCP1Q9H5V8 836 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 RETREG1Q9H6L5 497 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 ZNF639Q9UID6 485 aa16.82■□□□□ 0.28
ATPAF1-214ENST00000576409 TRAV18A0A075B6X5 111 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 A0A1W2PQU0 124 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 KRT33AO76009 404 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 KCNK2O95069 426 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 JUNDP17535 347 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 TGM1P22735 817 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 ETV5P41161 510 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 ETV1P50549 477 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 CCR6P51684 374 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 PYHIN1Q6K0P9 492 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 ABHD13Q7L211 337 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 LACC1Q8IV20 430 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 NEK7Q8TDX7 302 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 ZNF582Q96NG8 517 aaPredicted RBP16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 IL21RQ9HBE5 538 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 BABAM2Q9NXR7 383 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 ZNF226Q9NYT6 803 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 RCE1Q9Y256 329 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 DRD2P14416 443 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 NPPBP16860 134 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 IL12BP29460 328 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 NKPD1Q17RQ9 610 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 ENTPD8Q5MY95 495 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 FAM109AQ8N4B1 249 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 SMAP2Q8WU79 429 aaPredicted RBP16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 TSACCQ96A04 125 aaPredicted RBP16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 GPR174Q9BXC1 333 aa16.81■□□□□ 0.28
ATPAF1-214ENST00000576409 ALOXE3Q9BYJ1 711 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms