RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 LEFTY2O00292 366 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 PRAMEF2O60811 474 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 B3GALT4O96024 378 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 CSF3P09919 207 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 ACTBP60709 375 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 ACTG1P63261 375 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 MRPS10P82664 201 aaKnown RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 SP3Q02447 781 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZMAT1Q5H9K5 638 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 CPA6Q8N4T0 437 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 BOLLQ8N9W6 283 aaKnown RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 SLC38A5Q8WUX1 472 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 MTHFD2LQ9H903 347 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 ATP13A2Q9NQ11 1180 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 ITGB4P16144 1822 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 GRXCR1A8MXD5 290 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 EIF1AYO14602 144 aaKnown RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 AMY2AP04746 511 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF20P17024 532 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 NFYAP23511 347 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 S100GP29377 79 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 MAT2AP31153 395 aaKnown RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 EIF1AXP47813 144 aaKnown RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 RTP2Q5QGT7 225 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 CD276Q5ZPR3 534 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 VITQ6UXI7 678 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 TREX2Q9BQ50 279 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 SRRQ9GZT4 340 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 Q9N2J8 555 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 GPN3Q9UHW5 284 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 USP54Q70EL1 1684 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 H0YIV9 168 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 KLK8O60259 260 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 HRGP04196 525 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 HMGN2P05204 90 aaKnown RBP12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 CBLP22681 906 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 PTBP1P26599 531 aaKnown RBP eCLIP12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 SHC1P29353 583 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 PRSS3P35030 304 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 CTNNB1P35222 781 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 ETV1P50549 477 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 KCNJ10P78508 379 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 LY6G5CQ5SRR4 150 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 PIP5KL1Q5T9C9 394 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 NXNL2Q5VZ03 156 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 FAHD1Q6P587 224 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 SMPDL3BQ92485 455 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 ARL11Q969Q4 196 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 MAP6Q96JE9 813 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 C4orf36Q96KX1 117 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF416Q9BWM5 594 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 SMG9Q9H0W8 520 aaKnown RBP12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 RNF13O43567 381 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 LATS1O95835 1130 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 CXCR1P25024 350 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 ELAVL4P26378 380 aaKnown RBP12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 IGFALSP35858 605 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 HOXC5Q00444 222 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 IRF5Q13568 498 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 GFOD2Q3B7J2 385 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 CDNFQ49AH0 187 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 APOOLQ6UXV4 268 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 FAM83HQ6ZRV2 1179 aaPredicted RBP12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZMYND19Q96E35 227 aaPredicted RBP12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 RGCCQ9H4X1 137 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 SRA1Q9HD15 236 aaKnown RBP12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 BIN3Q9NQY0 253 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 SLC7A7Q9UM01 511 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 A8MUA0 341 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 KAT7O95251 611 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 SCGB1D2O95969 90 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 LALBAP00709 142 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 CD70P32970 193 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 TPMTP51580 245 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 TSPAN31Q12999 210 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 FCRLBQ6BAA4 426 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF454Q8N9F8 522 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR4E2Q8NGC2 313 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 ANGPTL6Q8NI99 470 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 SLC6A7Q99884 636 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF700Q9H0M5 742 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 RXFP3Q9NSD7 469 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 SCN7AQ01118 1682 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 M0R082 166 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 SCO1O75880 301 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 SCGNO76038 276 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 PPP1R3DO95685 299 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 PRR35P0CG20 571 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 POLR2CP19387 275 aaPredicted RBP12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 M6PRP20645 277 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 GABRA3P34903 492 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 GPR176Q14439 515 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 TMEM35AQ53FP2 167 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 RNASE10Q5GAN6 216 aaKnown RBP12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF550Q7Z398 422 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 NUP54Q7Z3B4 507 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 KCTD20Q7Z5Y7 419 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 SLC9B2Q86UD5 537 aa12.36□□□□□ -0.43
PCDHGB3-201ENST00000576222 NLRP8Q86W28 1048 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms