RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 DSCAMO60469 2012 aa9.39□□□□□ -0.91
TVP23B-208ENST00000575261 ANK3Q12955 4377 aaKnown RBP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 TRIM64A6NGJ6 449 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 TRIM64BA6NI03 449 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 TTC36A6NLP5 189 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 H3BQF6 201 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 SMAD7O15105 426 aaKnown RBP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 RSL1D1O76021 490 aaKnown RBP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 ANGPTL1O95841 491 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 PLGP00747 810 aaPredicted RBP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 GSTA1P08263 222 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 PPP3CBP16298 524 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 TBXA2RP21731 343 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 LOXP28300 417 aaPredicted RBP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 GCAP28676 217 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 EIF1AXP47813 144 aaKnown RBP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 FOXA1P55317 472 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 PRR5P85299 388 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 EXOC3L2Q2M3D2 409 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 BEX5Q5H9J7 111 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 PLEKHM3Q6ZWE6 761 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 MARCH3Q86UD3 253 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 CNPY4Q8N129 248 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 NOA1Q8NC60 698 aaKnown RBP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 PPP1R14CQ8TAE6 165 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 FAM76AQ8TAV0 307 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 ACMSDQ8TDX5 336 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 ELP4Q96EB1 424 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 CCDC126Q96EE4 140 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 GMPPAQ96IJ6 420 aaPredicted RBP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 C16orf45Q96MC5 204 aaPredicted RBP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 PRRG4Q9BZD6 226 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 GSTO2Q9H4Y5 243 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 HHATLQ9HCP6 504 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 FANCFQ9NPI8 374 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 PAQR5Q9NXK6 330 aaPredicted RBP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 MCTS1Q9ULC4 181 aaKnown RBP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 VDAC3Q9Y277 283 aa9.38□□□□□ -0.91
TVP23B-208ENST00000575261 POLR3HQ9Y535 204 aaPredicted RBP9.38□□□□□ -0.91
TVP23B-208ENST00000575261 ROS1P08922 2347 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 CSPG4Q6UVK1 2322 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 A0A087WZY1 265 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.37□□□□□ -0.91
TVP23B-208ENST00000575261 GOLGA8RI6L899 631 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 EIF1AYO14602 144 aaKnown RBP9.37□□□□□ -0.91
TVP23B-208ENST00000575261 GMFGO60234 142 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 SS18L1O75177 396 aaPredicted RBP9.37□□□□□ -0.91
TVP23B-208ENST00000575261 CRCPO75575 148 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 AQP8O94778 261 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 UTS2O95399 124 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 PCSK6P29122 969 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 GABRA3P34903 492 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 GPC1P35052 558 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 PTH2RP49190 550 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 NR1H2P55055 460 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 CTBP2P56545 445 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 NAA20P61599 178 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 PPP2R2BQ00005 443 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 HSPB3Q12988 150 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 PRSS53Q2L4Q9 553 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 TMEM44Q2T9K0 475 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 GRAMD1BQ3KR37 738 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 VPS26BQ4G0F5 336 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 GLE1Q53GS7 698 aaKnown RBP9.37□□□□□ -0.91
TVP23B-208ENST00000575261 ANKRD34AQ69YU3 496 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 NOXRED1Q6NXP6 359 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 TRIM46Q7Z4K8 759 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 WDR75Q8IWA0 830 aaKnown RBP9.37□□□□□ -0.91
TVP23B-208ENST00000575261 CCNYL1Q8N7R7 359 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 MNS1Q8NEH6 495 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 TMEM171Q8WVE6 324 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 CXorf56Q9H5V9 222 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 EQTNQ9NQ60 294 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 PSMC3IPQ9P2W1 217 aaPredicted RBP9.37□□□□□ -0.91
TVP23B-208ENST00000575261 ATRQ13535 2644 aa9.37□□□□□ -0.91
TVP23B-208ENST00000575261 PCNX3Q9H6A9 2034 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 GXYLT2A0PJZ3 443 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 C7orf72A4D263 438 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 SHISA8B8ZZ34 492 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 ALG1L2C9J202 215 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 UBFD1O14562 309 aaKnown RBP9.36□□□□□ -0.91
TVP23B-208ENST00000575261 PDPK1O15530 556 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 RIPK2O43353 540 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 TMCC2O75069 709 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 GLRA3O75311 464 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 CNOT4O95628 575 aaKnown RBP9.36□□□□□ -0.91
TVP23B-208ENST00000575261 OXSR1O95747 527 aaPredicted RBP9.36□□□□□ -0.91
TVP23B-208ENST00000575261 THBDP07204 575 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 NGFRP08138 427 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 MYL2P10916 166 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 PYGBP11216 843 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 ME2P23368 584 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 SLC6A8P48029 635 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 SLC29A2Q14542 456 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 APOOLQ6UXV4 268 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 ZYG11AQ6WRX3 759 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 ZNF704Q6ZNC4 412 aaPredicted RBP9.36□□□□□ -0.91
TVP23B-208ENST00000575261 BEND4Q6ZU67 534 aa9.36□□□□□ -0.91
TVP23B-208ENST00000575261 FRMD7Q6ZUT3 714 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms