RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 MRGPRGQ86SM5 289 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 YRDCQ86U90 279 aaKnown RBP7.87□□□□□ -1.15
SMG6-216ENST00000575176 ANKRD46Q86W74 232 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 PLCZ1Q86YW0 608 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 LIX1LQ8IVB5 337 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 FUNDC1Q8IVP5 155 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 KIRREL3Q8IZU9 778 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 RELL2Q8NC24 303 aaPredicted RBP7.87□□□□□ -1.15
SMG6-216ENST00000575176 CHDHQ8NE62 594 aaPredicted RBP7.87□□□□□ -1.15
SMG6-216ENST00000575176 STON2Q8WXE9 905 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 WDYHV1Q96HA8 205 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 TTYH2Q9BSA4 534 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 YIPF4Q9BSR8 244 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 INPP5KQ9BT40 448 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 RSPO3Q9BXY4 272 aaPredicted RBP7.87□□□□□ -1.15
SMG6-216ENST00000575176 PIGUQ9H490 435 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 Q9N2J8 555 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 NKIRAS1Q9NYS0 192 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 KLRF1Q9NZS2 232 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 CLCF1Q9UBD9 225 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 Q9UFV3 132 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 RNF6Q9Y252 685 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 EIF3LQ9Y262 564 aaKnown RBP7.87□□□□□ -1.15
SMG6-216ENST00000575176 MRPS18CQ9Y3D5 142 aaKnown RBP7.87□□□□□ -1.15
SMG6-216ENST00000575176 KLF2Q9Y5W3 355 aaPredicted RBP7.87□□□□□ -1.15
SMG6-216ENST00000575176 USH1CQ9Y6N9 552 aa7.87□□□□□ -1.15
SMG6-216ENST00000575176 RAI1Q7Z5J4 1906 aaPredicted RBP7.86□□□□□ -1.15
SMG6-216ENST00000575176 TRBV5-3A0A0A0MS03 114 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 NPIPA5A0A0B4J1W7 369 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 RNF103-CHMP3A0A140T963 221 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 A0A1W2PQD3 144 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 NPIPA7E9PJI5 369 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 ETV2O00321 342 aaPredicted RBP7.86□□□□□ -1.15
SMG6-216ENST00000575176 PRRG2O14669 202 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 HCRTR2O43614 444 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 DNAJA2O60884 412 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 ADAM11O75078 769 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 WDR1O75083 606 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 NTN1O95631 604 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 PGRP06401 933 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 NPIPA8P0DM63 369 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 ZNF708P17019 499 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 TBXA2RP21731 343 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 IL12BP29460 328 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 CEACAM8P31997 349 aaPredicted RBP7.86□□□□□ -1.15
SMG6-216ENST00000575176 GPC1P35052 558 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 KIR3DL1P43629 444 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 CCT3P49368 545 aaKnown RBP7.86□□□□□ -1.15
SMG6-216ENST00000575176 NME5P56597 212 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 PER3P56645 1201 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 PPP2R2AP63151 447 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 DECR1Q16698 335 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 ZNF630Q2M218 657 aaPredicted RBP7.86□□□□□ -1.15
SMG6-216ENST00000575176 DPY19L1Q2PZI1 675 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 GTDC1Q4AE62 458 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 C1orf185Q5T7R7 199 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 ATG16L1Q676U5 607 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 OR5M10Q6IEU7 315 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 PLXDC2Q6UX71 529 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 SPATA19Q7Z5L4 167 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 MARCH3Q86UD3 253 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 GGNQ86UU5 652 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 PACS2Q86VP3 889 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 CCDC71Q8IV32 467 aaPredicted RBP7.86□□□□□ -1.15
SMG6-216ENST00000575176 MSRB3Q8IXL7 192 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 C10orf111Q8N326 155 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 FAM71CQ8NEG0 241 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 OR56A1Q8NGH5 318 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 OR1J4Q8NGS1 313 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 CEP70Q8NHQ1 597 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 POC1BQ8TC44 478 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 GPR151Q8TDV0 419 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 CKAP2Q8WWK9 683 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 SLC9A6Q92581 669 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 VPS33AQ96AX1 596 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 TMCO6Q96DC7 493 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 NEURL3Q96EH8 262 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 C1GALT1C1Q96EU7 318 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 ADGRG7Q96K78 797 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 JSRP1Q96MG2 331 aaPredicted RBP7.86□□□□□ -1.15
SMG6-216ENST00000575176 OR7D2Q96RA2 312 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 BTBD2Q9BX70 525 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 ACTRT3Q9BYD9 372 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 TRIM8Q9BZR9 551 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 DPY30Q9C005 99 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 ZNF350Q9GZX5 532 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 ATAD3AQ9NVI7 634 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 B4GALT7Q9UBV7 327 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 BTNL2Q9UIR0 455 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 OR10H1Q9Y4A9 318 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 FREM1Q5H8C1 2179 aa7.86□□□□□ -1.15
SMG6-216ENST00000575176 DSPPQ9NZW4 1301 aa7.85□□□□□ -1.15
SMG6-216ENST00000575176 PRSS51A0A1B0GVH4 220 aa7.85□□□□□ -1.15
SMG6-216ENST00000575176 C7orf72A4D263 438 aa7.85□□□□□ -1.15
SMG6-216ENST00000575176 MBD3L4A6NDZ8 208 aaPredicted RBP7.85□□□□□ -1.15
SMG6-216ENST00000575176 MBD3L3A6NE82 208 aaPredicted RBP7.85□□□□□ -1.15
SMG6-216ENST00000575176 MBD3L5A6NJ08 208 aaPredicted RBP7.85□□□□□ -1.15
SMG6-216ENST00000575176 TRPC5OSA6NMA1 111 aa7.85□□□□□ -1.15
SMG6-216ENST00000575176 SHISA8B8ZZ34 492 aa7.85□□□□□ -1.15
SMG6-216ENST00000575176 SLCO1B7G3V0H7 640 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms