RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 BCL2L10Q9HD36 194 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 DSPPQ9NZW4 1301 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 MKLN1Q9UL63 735 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 ANGPT4Q9Y264 503 aa15.67■□□□□ 0.1
NUP88-210ENST00000574867 SCDO00767 359 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 RRP9O43818 475 aaKnown RBP15.66■□□□□ 0.1
NUP88-210ENST00000574867 FCMRO60667 390 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 HPGDP15428 266 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 PCGF2P35227 344 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 ATP12AP54707 1039 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 EEFSECP57772 596 aaKnown RBP15.66■□□□□ 0.1
NUP88-210ENST00000574867 GABPB1Q06547 395 aaPredicted RBP15.66■□□□□ 0.1
NUP88-210ENST00000574867 BNIP1Q12981 228 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 INAQ16352 499 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 DESI1Q6ICB0 168 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 REEP3Q6NUK4 255 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 SLC30A6Q6NXT4 461 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 ZZZ3Q8IYH5 903 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 DEFB107AQ8IZN7 70 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 FAM98AQ8NCA5 519 aaKnown RBP15.66■□□□□ 0.1
NUP88-210ENST00000574867 HIPK4Q8NE63 616 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 GRHL3Q8TE85 626 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 ZNF583Q96ND8 569 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 TREX2Q9BQ50 279 aaPredicted RBP15.66■□□□□ 0.1
NUP88-210ENST00000574867 ANGPTL4Q9BY76 406 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 TBL1XR1Q9BZK7 514 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 ALG2Q9H553 416 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 RUBCNLQ9H714 662 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 KLHL1Q9NR64 748 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 TMEM181Q9P2C4 612 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 A0A0G2JPF8 293 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 HNRNPCL2B2RXH8 293 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 HNRNPCL3B7ZW38 293 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 NPIPB9F8W1W9 429 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 KLRC4-KLRK1H3BQV0 150 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 EBAG9O00559 213 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 FADS1O60427 444 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 ATP5HO75947 161 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 SNX4O95219 450 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 ZIC2O95409 532 aaPredicted RBP15.66■□□□□ 0.1
NUP88-210ENST00000574867 OXSR1O95747 527 aaPredicted RBP15.66■□□□□ 0.1
NUP88-210ENST00000574867 HNRNPCL4P0DMR1 293 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 CNR1P21554 472 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 CHRNEQ04844 493 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 KLRB1Q12918 225 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 GPR68Q15743 365 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 PRAMEF20Q5VT98 475 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 GALNTL5Q7Z4T8 443 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 POGLUT1Q8NBL1 392 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 OR2T12Q8NG77 320 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 OR4C3Q8NH37 302 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 NFKBIDQ8NI38 313 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 FAM173AQ9BQD7 235 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 DOHHQ9BU89 302 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 MFRPQ9BY79 579 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 HES7Q9BYE0 225 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 ADA2Q9NZK5 511 aa15.66■□□□□ 0.1
NUP88-210ENST00000574867 SUCOQ9UBS9 1254 aaKnown RBP15.66■□□□□ 0.1
NUP88-210ENST00000574867 A0A1W2PQD3 144 aa15.65■□□□□ 0.1
NUP88-210ENST00000574867 ALG1L2C9J202 215 aa15.65■□□□□ 0.1
NUP88-210ENST00000574867 KCNJ2P63252 427 aa15.65■□□□□ 0.1
NUP88-210ENST00000574867 LIPEQ05469 1076 aa15.65■□□□□ 0.1
NUP88-210ENST00000574867 ZNF141Q15928 474 aa15.65■□□□□ 0.1
NUP88-210ENST00000574867 VMACQ2NL98 169 aa15.65■□□□□ 0.1
NUP88-210ENST00000574867 SPATS1Q496A3 300 aa15.65■□□□□ 0.1
NUP88-210ENST00000574867 INTS11Q5TA45 600 aaKnown RBP15.65■□□□□ 0.1
NUP88-210ENST00000574867 RPUSD3Q6P087 351 aaKnown RBP15.65■□□□□ 0.1
NUP88-210ENST00000574867 BNC2Q6ZN30 1099 aaPredicted RBP15.65■□□□□ 0.1
NUP88-210ENST00000574867 RINLQ6ZS11 566 aa15.65■□□□□ 0.1
NUP88-210ENST00000574867 TEX19Q8NA77 164 aa15.65■□□□□ 0.1
NUP88-210ENST00000574867 MTHFD2LQ9H903 347 aaPredicted RBP15.65■□□□□ 0.1
NUP88-210ENST00000574867 CACYBPQ9HB71 228 aaKnown RBP15.65■□□□□ 0.1
NUP88-210ENST00000574867 FLRT3Q9NZU0 649 aa15.65■□□□□ 0.1
NUP88-210ENST00000574867 WIF1Q9Y5W5 379 aa15.65■□□□□ 0.1
NUP88-210ENST00000574867 KMT2BQ9UMN6 2715 aaPredicted RBP15.65■□□□□ 0.1
NUP88-210ENST00000574867 PGM3O95394 542 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 RASSF2P50749 326 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 VEZF1Q14119 521 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 NADK2Q4G0N4 442 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 SAMD4BQ5PRF9 694 aaKnown RBP15.64■□□□□ 0.09
NUP88-210ENST00000574867 BICRALQ6AI39 1079 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 OLIG3Q7RTU3 272 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 ARHGAP24Q8N264 748 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 NTNG2Q96CW9 530 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 PIF1Q9H611 641 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 SDHAF3Q9NRP4 125 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 DEPPQ9NTK1 212 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 DTNAQ9Y4J8 743 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 PIEZO2Q9H5I5 2752 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 H3BNH8 94 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 PEX1O43933 1283 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 UGT2B17O75795 530 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 ETS2P15036 469 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 ENDOUP21128 410 aaKnown RBP15.64■□□□□ 0.09
NUP88-210ENST00000574867 PTGDSP41222 190 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 DNAL1Q4LDG9 190 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 RPS26P11Q5JNZ5 115 aaPredicted RBP15.64■□□□□ 0.09
NUP88-210ENST00000574867 PACS2Q86VP3 889 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 KRT73Q86Y46 540 aa15.64■□□□□ 0.09
NUP88-210ENST00000574867 MISPQ8IVT2 679 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms