RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 OR4K5Q8NGD3 323 aa26.36■■□□□ 1.81
CTDNEP1-210ENST00000574322 C16orf52Q8NHV5 167 aa26.36■■□□□ 1.81
CTDNEP1-210ENST00000574322 RHOXF1Q8NHV9 184 aa26.36■■□□□ 1.81
CTDNEP1-210ENST00000574322 PTPMT1Q8WUK0 201 aaPredicted RBP26.36■■□□□ 1.81
CTDNEP1-210ENST00000574322 SLC38A4Q969I6 547 aa26.36■■□□□ 1.81
CTDNEP1-210ENST00000574322 CNPPD1Q9BV87 410 aa26.36■■□□□ 1.81
CTDNEP1-210ENST00000574322 RNF6Q9Y252 685 aa26.36■■□□□ 1.81
CTDNEP1-210ENST00000574322 IGHV5-10-1A0A0J9YXX1 117 aa26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 CDHR4A6H8M9 788 aa26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 GDF9O60383 454 aa26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 WBP4O75554 376 aaKnown RBP26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 CHMP24386 653 aa26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 RHAGQ02094 409 aa26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 ALDH6A1Q02252 535 aaKnown RBP26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 PTGES3Q15185 160 aaKnown RBP26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 MCHR1Q99705 422 aa26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 ARMC7Q9H6L4 198 aa26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 MKKSQ9NPJ1 570 aaPredicted RBP26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 DTX4Q9Y2E6 619 aa26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 TPRKBQ9Y3C4 175 aa26.35■■□□□ 1.81
CTDNEP1-210ENST00000574322 CLDN24A6NM45 220 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 PEX12O00623 359 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 FMO6PO60774 539 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 HTR1AP08908 422 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 CT45A8P0DMV1 189 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 CT45A9P0DMV2 189 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 TTKP33981 857 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 ZBED5Q49AG3 693 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 CT45A2Q5DJT8 189 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 ENTPD8Q5MY95 495 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 NPSR1Q6W5P4 371 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 KCTD8Q6ZWB6 473 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 BPIFB6Q8NFQ5 453 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 APH1BQ8WW43 257 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 TUBA1CQ9BQE3 449 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 YIPF2Q9BWQ6 316 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 Q9N2J8 555 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 PCDHGB2Q9Y5G2 931 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 CEPT1Q9Y6K0 416 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 SYNDIG1LA6NDD5 238 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 C4orf47A7E2U8 309 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 C17orf105B2RV13 164 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 MRPS14O60783 128 aaKnown RBP26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 RORAP35398 523 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 CNPY1Q3B7I2 92 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 MRPL2Q5T653 305 aaKnown RBP26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 ZER1Q7Z7L7 766 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 TMIGD2Q96BF3 282 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 SCN3BQ9NY72 215 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 PCDHGA10Q9Y5H3 936 aa26.34■■□□□ 1.81
CTDNEP1-210ENST00000574322 RIF1Q5UIP0 2472 aaKnown RBP26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 A0A087WUU8 490 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 TCRBV16S1A1N1A0A5B0 115 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 GABRB1P18505 474 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 TNNI3P19429 210 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 DUSP3P51452 185 aaPredicted RBP26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 PGDP52209 483 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 SLC35A2P78381 396 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 TARDBPQ13148 414 aaKnown RBP eCLIP26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 ZSWIM7Q19AV6 140 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 ZAR1Q86SH2 424 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 GRAMD2AQ8IUY3 354 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 SPARTQ8N0X7 666 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 RCBTB1Q8NDN9 531 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 FAM81AQ8TBF8 368 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 UBE2FQ969M7 185 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 SENP5Q96HI0 755 aaPredicted RBP26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 G6PC3Q9BUM1 346 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 PRR14Q9BWN1 585 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 TGIF2Q9GZN2 237 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 PLCXD1Q9NUJ7 323 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 PAK1IP1Q9NWT1 392 aaPredicted RBP26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 PCDHGB1Q9Y5G3 927 aa26.33■■□□□ 1.81
CTDNEP1-210ENST00000574322 CPSF4LA6NMK7 179 aaKnown RBP26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 NPIPB9F8W1W9 429 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 IGKV1D-16P01601 117 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 MMP11P24347 488 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 FMO3P31513 532 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 IFNGR2P38484 337 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 ZNF141Q15928 474 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 DECR1Q16698 335 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 FLYWCH1Q4VC44 716 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 ARHGAP40Q5TG30 622 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 PLEKHM3Q6ZWE6 761 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 RANBP3LQ86VV4 465 aaPredicted RBP26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 TMEM151BQ8IW70 566 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 IFI44Q8TCB0 444 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 POLR1BQ9H9Y6 1135 aa26.32■■□□□ 1.8
CTDNEP1-210ENST00000574322 SEC16AO15027 2179 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 XPNPEP2O43895 674 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 TP53P04637 393 aaPredicted RBP26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 GSTM3P21266 225 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 DRD5P21918 477 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 FOXD4Q12950 439 aaPredicted RBP26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 ELAVL1Q15717 326 aaKnown RBP26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 GPR141Q7Z602 305 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 OR4N2Q8NGD1 307 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 SLC35B4Q969S0 331 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 VCX3AQ9NNX9 186 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 CTPS2Q9NRF8 586 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms