RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 UBQLNLQ8IYU4 475 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 KIRREL3Q8IZU9 778 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 GCNT2Q8N0V5 402 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 KRTCAP2Q8N6L1 136 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 NATD1Q8N6N6 113 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 FADS6Q8N9I5 356 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 GATSQ8NAP1 163 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 NUP43Q8NFH3 380 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 OR2M3Q8NG83 312 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 OR5M1Q8NGP8 315 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 TUBGCP3Q96CW5 907 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 MTERF3Q96E29 417 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 GIMAP5Q96F15 307 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 CHMP6Q96FZ7 201 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 C16orf58Q96GQ5 468 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 PPP3R2Q96LZ3 170 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 ZNF559Q9BR84 538 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 G6PC3Q9BUM1 346 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 TBL1XR1Q9BZK7 514 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 C3orf14Q9HBI5 128 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 MCCC2Q9HCC0 563 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 SIRT3Q9NTG7 399 aaPredicted RBP9.05□□□□□ -0.96
RPA1-206ENST00000573994 FAM120CQ9NX05 1096 aaKnown RBP9.05□□□□□ -0.96
RPA1-206ENST00000573994 ITGB1BP2Q9UKP3 347 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 ABCG2Q9UNQ0 655 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 MRPS18CQ9Y3D5 142 aaKnown RBP9.05□□□□□ -0.96
RPA1-206ENST00000573994 L3MBTL1Q9Y468 752 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 SNX8Q9Y5X2 465 aa9.05□□□□□ -0.96
RPA1-206ENST00000573994 TEP1Q99973 2627 aaKnown RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 CELSR1Q9NYQ6 3014 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 MBD3L4A6NDZ8 208 aaPredicted RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 MBD3L3A6NE82 208 aaPredicted RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 MBD3L5A6NJ08 208 aaPredicted RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 CD8B2A6NJW9 211 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 CLCA1A8K7I4 914 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 ZIC3O60481 467 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 SOX30O94993 753 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 KCNH1O95259 989 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 SERPINE1P05121 402 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 TMIGD3P0DMS9 266 aaPredicted RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 HK1P19367 917 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 POU3F2P20265 443 aaPredicted RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 CAPN3P20807 821 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 TIMP3P35625 211 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 RPL3P39023 403 aaKnown RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 FRKP42685 505 aaPredicted RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 CLK3P49761 638 aaKnown RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 ASCL1P50553 236 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 DGKQP52824 942 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 CLDN18P56856 261 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 B3GALT5-AS1P59052 145 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 LASP1Q14847 261 aaKnown RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 DUSP5Q16690 384 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 SPDYE7PQ495Y7 208 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 VPS26BQ4G0F5 336 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 C6orf136Q5SQH8 315 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 CCNJQ5T5M9 372 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 IL23RQ5VWK5 629 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 AAGABQ6PD74 315 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 FIGNL1Q6PIW4 674 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 POMZP3Q6PJE2 187 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 ENPP6Q6UWR7 440 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 LRIG3Q6UXM1 1119 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 APOOLQ6UXV4 268 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 R3HCC1LQ7Z5L2 792 aaKnown RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 CDH24Q86UP0 819 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 ZNF781Q8N8C0 355 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 COX18Q8N8Q8 333 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 CDRT4Q8N9R6 151 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 OR6Y1Q8NGX8 325 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 CEP70Q8NHQ1 597 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 MBD3L2Q8NHZ7 208 aaPredicted RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 SMPDL3BQ92485 455 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 FAM120BQ96EK7 910 aaKnown RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 LRRC46Q96FV0 321 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 ZIM3Q96PE6 472 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 SH3GL2Q99962 352 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 SSU72Q9NP77 194 aaKnown RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 SDHAF3Q9NRP4 125 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 ACSS1Q9NUB1 689 aaPredicted RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 ZCCHC3Q9NUD5 404 aaKnown RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 ZNF629Q9UEG4 869 aaPredicted RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 ATP6V1HQ9UI12 483 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 RAB21Q9UL25 225 aa9.04□□□□□ -0.96
RPA1-206ENST00000573994 PHF3Q92576 2039 aaKnown RBP9.04□□□□□ -0.96
RPA1-206ENST00000573994 INTS1Q8N201 2190 aaKnown RBP9.03□□□□□ -0.96
RPA1-206ENST00000573994 KIAA1549Q9HCM3 1950 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 H0YC42 278 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 SEC14L5O43304 696 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 EMC8O43402 210 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 NKX2-2O95096 273 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 ZWINTO95229 277 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 OXSR1O95747 527 aaPredicted RBP9.03□□□□□ -0.96
RPA1-206ENST00000573994 ANGPTL1O95841 491 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 C6orf47O95873 294 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 G6PDP11413 515 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 CPN1P15169 458 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 ZNF708P17019 499 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 BGNP21810 368 aa9.03□□□□□ -0.96
RPA1-206ENST00000573994 SOAT1P35610 550 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms