RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SLC2A12Q8TD20 617 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 FKBP10Q96AY3 582 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 HS6ST2Q96MM7 605 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 ZNF583Q96ND8 569 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 TRNT1Q96Q11 434 aaKnown RBP9.42□□□□□ -0.9
SMG6-213ENST00000573166 PINK1Q9BXM7 581 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 SEC61A2Q9H9S3 476 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 CCNB1IP1Q9NPC3 277 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 SLAMF7Q9NQ25 335 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 TIGARQ9NQ88 270 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 OCIAD1Q9NX40 245 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 RIMS3Q9UJD0 308 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 CARD8Q9Y2G2 431 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 A0A1W2PPV9 198 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 PRR33A8MZF0 331 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 CASC3O15234 703 aaKnown RBP9.42□□□□□ -0.9
SMG6-213ENST00000573166 RAD1O60671 282 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 CCDC159P0C7I6 412 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 SMSP52788 366 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 GAB1Q13480 694 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 AHSA2Q719I0 299 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 STON2Q8WXE9 905 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 CNRIP1Q96F85 164 aaPredicted RBP9.42□□□□□ -0.9
SMG6-213ENST00000573166 DCAF13Q9NV06 445 aaKnown RBP9.42□□□□□ -0.9
SMG6-213ENST00000573166 C19orf53Q9UNZ5 99 aaPredicted RBP9.42□□□□□ -0.9
SMG6-213ENST00000573166 USP22Q9UPT9 525 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 SATB2Q9UPW6 733 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 KCNE1BA0A087WTH5 132 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 IGHV5-10-1A0A0J9YXX1 117 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 FAAHO00519 579 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 RGS5O15539 181 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 KLK10O43240 276 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 FADS2O95864 444 aaKnown RBP9.42□□□□□ -0.9
SMG6-213ENST00000573166 MAGEA8P43361 318 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 ARFIP1P53367 373 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 ATP12AP54707 1039 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 MYBPC1Q00872 1141 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 AMER3Q8N944 861 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 OR4K5Q8NGD3 323 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 DUSP19Q8WTR2 217 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 IP6K3Q96PC2 410 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 CDCP1Q9H5V8 836 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 CXorf21Q9HAI6 301 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 TAS2R10Q9NYW0 307 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 ACAD8Q9UKU7 415 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 BTBD3Q9Y2F9 522 aa9.42□□□□□ -0.9
SMG6-213ENST00000573166 RP1P56715 2156 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 GFRA3O60609 400 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 IL33O95760 270 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 GDF1P27539 372 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 SLC6A6P31641 620 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 STT3AP46977 705 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 SLC6A8P48029 635 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 NR1H2P55055 460 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 SLC14A1Q13336 389 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 KRR1Q13601 381 aaKnown RBP9.41□□□□□ -0.9
SMG6-213ENST00000573166 ATP6AP1Q15904 470 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 OLIG3Q7RTU3 272 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 GOLM1Q8NBJ4 401 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 OR7G2Q8NG99 324 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 SNX33Q8WV41 574 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 SGTBQ96EQ0 304 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 SLC41A3Q96GZ6 507 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 SACM1LQ9NTJ5 587 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 GMPR2Q9P2T1 348 aaKnown RBP9.41□□□□□ -0.9
SMG6-213ENST00000573166 RAB26Q9ULW5 256 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 A0A0A6YYD5 115 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 A0A1W2PRG6 482 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 MAGEB3O15480 346 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 ZNF806P0C7X5 589 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 ZNF3P17036 446 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 ALDH3A2P51648 485 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 IST1P53990 364 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 MYBPC3Q14896 1274 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 SHQ1Q6PI26 577 aaKnown RBP9.41□□□□□ -0.9
SMG6-213ENST00000573166 RBP7Q96R05 134 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 POLDIP3Q9BY77 421 aaKnown RBP9.41□□□□□ -0.9
SMG6-213ENST00000573166 MAGIXQ9H6Y5 334 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 B3GALT1Q9Y5Z6 326 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 LOC100506127A0A0U1RQW1 187 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 PNMA8CA0A1B0GUJ8 204 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 C19orf67A6NJJ6 358 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 TRIM3O75382 744 aaPredicted RBP9.41□□□□□ -0.9
SMG6-213ENST00000573166 GPX2P18283 190 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 RPS3AP61247 264 aaKnown RBP9.41□□□□□ -0.9
SMG6-213ENST00000573166 DUSP5Q16690 384 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.41□□□□□ -0.9
SMG6-213ENST00000573166 MRPL2Q5T653 305 aaKnown RBP9.41□□□□□ -0.9
SMG6-213ENST00000573166 OGFOD3Q6PK18 319 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 D2HGDHQ8N465 521 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 PROKR2Q8NFJ6 384 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 GNPDA2Q8TDQ7 276 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 DNAJA4Q8WW22 397 aaPredicted RBP9.41□□□□□ -0.9
SMG6-213ENST00000573166 HSPBAP1Q96EW2 488 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 GRHPRQ9UBQ7 328 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 PCDHGA8Q9Y5G5 932 aa9.41□□□□□ -0.9
SMG6-213ENST00000573166 IRGMA1A4Y4 181 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 NPIPA2E9PIF3 369 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 NPIPA3F8WFD2 350 aa9.4□□□□□ -0.9
SMG6-213ENST00000573166 WISP3O95389 354 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms