RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 FAM53CQ9NYF3 392 aa16.53■□□□□ 0.24
PFN1-202ENST00000572383 SLAMF8Q9P0V8 285 aa16.53■□□□□ 0.24
PFN1-202ENST00000572383 B4GALT7Q9UBV7 327 aa16.53■□□□□ 0.24
PFN1-202ENST00000572383 ABCG2Q9UNQ0 655 aa16.53■□□□□ 0.24
PFN1-202ENST00000572383 OSGIN2Q9Y236 505 aa16.53■□□□□ 0.24
PFN1-202ENST00000572383 C15orf41Q9Y2V0 281 aa16.53■□□□□ 0.24
PFN1-202ENST00000572383 PCDHB14Q9Y5E9 798 aa16.53■□□□□ 0.24
PFN1-202ENST00000572383 LIPGQ9Y5X9 500 aa16.53■□□□□ 0.24
PFN1-202ENST00000572383 A0A096LPI6 279 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 B4DXG7 233 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 KRT75O95678 551 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 OXSR1O95747 527 aaPredicted RBP16.52■□□□□ 0.24
PFN1-202ENST00000572383 STSP08842 583 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 HOXB9P17482 250 aaPredicted RBP16.52■□□□□ 0.24
PFN1-202ENST00000572383 ATP6V1C1P21283 382 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 ELAVL4P26378 380 aaKnown RBP16.52■□□□□ 0.24
PFN1-202ENST00000572383 GDF1P27539 372 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 PER3P56645 1201 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 HEPHL1Q6MZM0 1159 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 OLIG3Q7RTU3 272 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 SPATA21Q7Z572 469 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 MARCH3Q86UD3 253 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 CHERPQ8IWX8 916 aaKnown RBP16.52■□□□□ 0.24
PFN1-202ENST00000572383 GHDCQ8N2G8 530 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 CHDHQ8NE62 594 aaPredicted RBP16.52■□□□□ 0.24
PFN1-202ENST00000572383 SDF2Q99470 211 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 TBL1XR1Q9BZK7 514 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 UBQLN3Q9H347 655 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 TPT1P8Q9HAU6 139 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 EXD2Q9NVH0 621 aa16.52■□□□□ 0.24
PFN1-202ENST00000572383 NPIPA5A0A0B4J1W7 369 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 A0A1B0GTH9 108 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 NPIPA7E9PJI5 369 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 HMGN4O00479 90 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 AGR2O95994 175 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 SNRPB2P08579 225 aaKnown RBP16.51■□□□□ 0.23
PFN1-202ENST00000572383 NPIPA8P0DM63 369 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 TBXA2RP21731 343 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 CLK3P49761 638 aaKnown RBP16.51■□□□□ 0.23
PFN1-202ENST00000572383 MVDP53602 400 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 FUT5Q11128 374 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 KLF10Q13118 480 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 STX5Q13190 355 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 SLC10A1Q14973 349 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 ARHGAP11BQ3KRB8 267 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 FLYWCH1Q4VC44 716 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.51■□□□□ 0.23
PFN1-202ENST00000572383 LRIF1Q5T3J3 769 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 C16orf62Q7Z3J2 963 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 FGD2Q7Z6J4 655 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 CPLX4Q7Z7G2 160 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 PLCZ1Q86YW0 608 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 MSRB3Q8IXL7 192 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 NMUR2Q9GZQ4 415 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 NSRP1Q9H0G5 558 aaKnown RBP16.51■□□□□ 0.23
PFN1-202ENST00000572383 UBQLN4Q9NRR5 601 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 PLSCR2Q9NRY7 297 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 SLC25A37Q9NYZ2 338 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 LEF1Q9UJU2 399 aaPredicted RBP16.51■□□□□ 0.23
PFN1-202ENST00000572383 NDUFAF1Q9Y375 327 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 MYO7BQ6PIF6 2116 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 NCKAP5O14513 1909 aa16.51■□□□□ 0.23
PFN1-202ENST00000572383 A0A1B0GUH1 482 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 PRAMEF27A3QJZ7 478 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 ANGPT2O15123 496 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 LRRTM2O43300 516 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 FCMRO60667 390 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 TRAPPC6AO75865 159 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 ANGPTL1O95841 491 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 AK1P00568 194 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 NGFRP08138 427 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 ETFAP13804 333 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 LCN1P31025 176 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 DCTP40126 519 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 TOMM20Q15388 145 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 ATAD3BQ5T9A4 648 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 RETREG3Q86VR2 466 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 GATSQ8NAP1 163 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 DUSP19Q8WTR2 217 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 ROPN1LQ96C74 230 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 QPCTLQ9NXS2 382 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 VAPAQ9P0L0 249 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 PPP4R1LQ9P1A2 415 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 FBXL2Q9UKC9 423 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 NINQ8N4C6 2090 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 CRYBG3Q68DQ2 2970 aa16.5■□□□□ 0.23
PFN1-202ENST00000572383 ALG1L2C9J202 215 aa16.49■□□□□ 0.23
PFN1-202ENST00000572383 CLIC1O00299 241 aa16.49■□□□□ 0.23
PFN1-202ENST00000572383 SCDO00767 359 aa16.49■□□□□ 0.23
PFN1-202ENST00000572383 STX11O75558 287 aa16.49■□□□□ 0.23
PFN1-202ENST00000572383 CBR3O75828 277 aa16.49■□□□□ 0.23
PFN1-202ENST00000572383 IGHG3P01860 377 aa16.49■□□□□ 0.23
PFN1-202ENST00000572383 HPNP05981 417 aa16.49■□□□□ 0.23
PFN1-202ENST00000572383 HPGDP15428 266 aa16.49■□□□□ 0.23
PFN1-202ENST00000572383 CRATP43155 626 aa16.49■□□□□ 0.23
PFN1-202ENST00000572383 RNF144AP50876 292 aaPredicted RBP16.49■□□□□ 0.23
PFN1-202ENST00000572383 RBPJQ06330 500 aa16.49■□□□□ 0.23
PFN1-202ENST00000572383 GPR68Q15743 365 aa16.49■□□□□ 0.23
PFN1-202ENST00000572383 SYPL1Q16563 259 aa16.49■□□□□ 0.23
PFN1-202ENST00000572383 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.49■□□□□ 0.236e-6■□□□□ 10
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms