RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CCNJQ5T5M9 372 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 FIGNL1Q6PIW4 674 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 Q71RC1 249 aaPredicted RBP12.18□□□□□ -0.46
CCDC40-205ENST00000571028 GPALPP1Q8IXQ4 340 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 COX18Q8N8Q8 333 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 C17orf47Q8NEP4 570 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 OR5D16Q8NGK9 328 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 PSMA8Q8TAA3 256 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 FAM57AQ8TBR7 257 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 GTF2H4Q92759 462 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 RAB8BQ92930 207 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 AURKBQ96GD4 344 aaPredicted RBP12.18□□□□□ -0.46
CCDC40-205ENST00000571028 ACTRT3Q9BYD9 372 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 OR51I1Q9H343 314 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 SERHLQ9NQF3 203 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 LEF1Q9UJU2 399 aaPredicted RBP12.18□□□□□ -0.46
CCDC40-205ENST00000571028 RNF6Q9Y252 685 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 KCNE3Q9Y6H6 103 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 CAPN7Q9Y6W3 813 aa12.18□□□□□ -0.46
CCDC40-205ENST00000571028 A0A1W2PP18 115 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 TP53I11O14683 189 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 PPM1BO75688 479 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 TOXO94900 526 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 KCNH1O95259 989 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 IFI6P09912 130 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 OR12D1P0DN82 309 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 ADSLP30566 484 aaPredicted RBP12.17□□□□□ -0.46
CCDC40-205ENST00000571028 TMED10P49755 219 aaKnown RBP12.17□□□□□ -0.46
CCDC40-205ENST00000571028 MEOX1P50221 254 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 TFF3Q07654 80 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 NFYCQ13952 458 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 DECR1Q16698 335 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 MMEL1Q495T6 779 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 SLC22A10Q63ZE4 541 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 BICRALQ6AI39 1079 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 CDC73Q6P1J9 531 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 MSANTD1Q6ZTZ1 278 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 SNX32Q86XE0 403 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 RNF130Q86XS8 419 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 SULF2Q8IWU5 870 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 POU5F2Q8N7G0 328 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 PSD4Q8NDX1 1056 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 XAGE5Q8WWM1 108 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 DIO2Q92813 273 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 SLC35A4Q96G79 324 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 JSRP1Q96MG2 331 aaPredicted RBP12.17□□□□□ -0.46
CCDC40-205ENST00000571028 ALPK1Q96QP1 1244 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 OR7D2Q96RA2 312 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 NODALQ96S42 347 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 PAIP1Q9H074 479 aaKnown RBP12.17□□□□□ -0.46
CCDC40-205ENST00000571028 TP63Q9H3D4 680 aaPredicted RBP12.17□□□□□ -0.46
CCDC40-205ENST00000571028 METTL7AQ9H8H3 244 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 DLL4Q9NR61 685 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 SACM1LQ9NTJ5 587 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 GPATCH2Q9NW75 528 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 SLAMF8Q9P0V8 285 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 NTMQ9P121 344 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.17□□□□□ -0.46
CCDC40-205ENST00000571028 PLEKHA6Q9Y2H5 1048 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 RPH3AQ9Y2J0 694 aaPredicted RBP12.17□□□□□ -0.46
CCDC40-205ENST00000571028 ARL2BPQ9Y2Y0 163 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 NDUFAF1Q9Y375 327 aa12.17□□□□□ -0.46
CCDC40-205ENST00000571028 A0A0G2JMM0 328 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 A0A1B0GTH9 108 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 A0A1W2PPB8 328 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 A0A1W2PRS3 328 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 C2orf72A6NCS6 295 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 TTC36A6NLP5 189 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 KIR3DP1A8MWS1 328 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 TO15178 435 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 PEX1O43933 1283 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 NME2P1O60361 137 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 UGT2B11O75310 529 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 NKX2-2O95096 273 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 KRT75O95678 551 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 IGKV1D-16P01601 117 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 KRT16P08779 473 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 NME2P22392 152 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 CRATP43155 626 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 TRPC1P48995 793 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 DNASE1L1P49184 302 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 POU6F2P78424 691 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-205ENST00000571028 MRPS22P82650 360 aaKnown RBP12.16□□□□□ -0.46
CCDC40-205ENST00000571028 CYP27C1Q4G0S4 372 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.16□□□□□ -0.468e-6■■■■■ 27.9
CCDC40-205ENST00000571028 SAXO2Q658L1 398 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 ZCCHC12Q6PEW1 402 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 OLIG3Q7RTU3 272 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 PIGWQ7Z7B1 504 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 RETREG3Q86VR2 466 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 CCDC71Q8IV32 467 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-205ENST00000571028 GOT1L1Q8NHS2 421 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-205ENST00000571028 SPPL2AQ8TCT8 520 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 SGCZQ96LD1 299 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 COL21A1Q96P44 957 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 CLEC4MQ9H2X3 399 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-205ENST00000571028 PIGUQ9H490 435 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 SERHL2Q9H4I8 314 aa12.16□□□□□ -0.46
CCDC40-205ENST00000571028 TRIM45Q9H8W5 580 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-205ENST00000571028 SLC52A3Q9NQ40 469 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms