RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CHRM4P08173 479 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 TFPTP0C1Z6 253 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 C1QTNF9P0C862 333 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 UQCRBP14927 111 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 ETS2P15036 469 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 IL7RP16871 459 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 ABCD3P28288 659 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 MSX2P35548 267 aaPredicted RBP6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 SOX18P35713 384 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 MAP2K3P46734 347 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 OC90Q02509 493 aaPredicted RBP6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 FUT5Q11128 374 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 TRAP1Q12931 704 aaKnown RBP6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 RAPSNQ13702 412 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 GPR68Q15743 365 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 ACER2Q5QJU3 275 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 AGAP7PQ5VUJ5 663 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 FCRLBQ6BAA4 426 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 GLYATQ6IB77 296 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 LCN8Q6JVE9 175 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 HEPHL1Q6MZM0 1159 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 CYP2R1Q6VVX0 501 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 FRRS1Q6ZNA5 592 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 FKBP9P1Q75LS8 142 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 SPATA24Q86W54 205 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 RPS19BP1Q86WX3 136 aaKnown RBP6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 PTRH1Q86Y79 214 aaKnown RBP6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 GPALPP1Q8IXQ4 340 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 C10orf67Q8IYJ2 551 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 EID3Q8N140 333 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 CYP4Z2PQ8N1L4 340 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 C10orf111Q8N326 155 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 TMCO5AQ8N6Q1 288 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 ZNF441Q8N8Z8 693 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 OR5M3Q8NGP4 307 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 OIT3Q8WWZ8 545 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 TM9SF4Q92544 642 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 PROX1Q92786 737 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 DIO2Q92813 273 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 PMM1Q92871 262 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 ADIPOR1Q96A54 375 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 SPACA9Q96E40 222 aaPredicted RBP6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 SLC35A4Q96G79 324 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 TPD52L3Q96J77 140 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 AGAP4Q96P64 663 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 RASL10BQ96S79 203 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 ADOQ96SZ5 270 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 TBL1XR1Q9BZK7 514 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 HOXD1Q9GZZ0 328 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 PCDHAC1Q9H158 963 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 CDCP1Q9H5V8 836 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 METTL7AQ9H8H3 244 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 LIN28AQ9H9Z2 209 aaKnown RBP6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 HHATLQ9HCP6 504 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 KLHL28Q9NXS3 571 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 ACTR3BQ9P1U1 418 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 CD300AQ9UGN4 299 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 BAG5Q9UL15 447 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 MKLN1Q9UL63 735 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 USP22Q9UPT9 525 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 POMPQ9Y244 141 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 IFT52Q9Y366 437 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 NPFFR2Q9Y5X5 522 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 KCNE3Q9Y6H6 103 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 V9GYQ6 96 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 RIF1Q5UIP0 2472 aaKnown RBP6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 UNC13CQ8NB66 2214 aa6.07□□□□□ -1.44
CTDNEP1-204ENST00000570484 MDC1Q14676 2089 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 DSPPQ9NZW4 1301 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 NPIPA5A0A0B4J1W7 369 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 PRAMEF25A6NGN4 478 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 OR6C70A6NIJ9 312 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 AQP12BA6NM10 295 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 NPIPA7E9PJI5 369 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 MASP2O00187 686 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 SUV39H1O43463 412 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 SCO2O43819 266 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 ICOSLGO75144 302 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 UTS2O95399 124 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 GPIP06744 558 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 PABPC4LP0CB38 370 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 NPIPA8P0DM63 369 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 NAGAP17050 411 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 HOXB6P17509 224 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 WT1P19544 449 aaPredicted RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 ENDOUP21128 410 aaKnown RBP6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 ATP6V1B2P21281 511 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 KDELR2P33947 212 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 SOX3P41225 446 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 MAP3K8P41279 467 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 MASP1P48740 699 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 CYB561P49447 251 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 GZMMP51124 257 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 CCL11P51671 97 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 CCR4P51679 360 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 PNLIPRP2P54317 469 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 MLF1P58340 268 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 CXADRP78310 365 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 ARG2P78540 354 aa6.06□□□□□ -1.44
CTDNEP1-204ENST00000570484 TLE3Q04726 772 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms