RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SIRT3Q9NTG7 399 aaPredicted RBP15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 DNAJB12Q9NXW2 375 aaKnown RBP15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ZNF175Q9Y473 711 aa15.44■□□□□ 0.06
MAP1LC3B-208ENST00000570189 AKAP6Q13023 2319 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 GXYLT2A0PJZ3 443 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 C7orf72A4D263 438 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SPAG7O75391 227 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 TNFRSF21O75509 655 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 TNFSF13O75888 250 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SNUPNO95149 360 aaKnown RBP15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SLU7O95391 586 aaKnown RBP15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ANGPTL1O95841 491 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ACP2P11117 423 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 EPXP11678 715 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 CD1EP15812 388 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 CREB1P16220 341 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ZNF17P17021 662 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 HK1P19367 917 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 DNAJA1P31689 397 aaKnown RBP15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 CLDN15P56746 228 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SRYQ05066 204 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 GRAMD1BQ3KR37 738 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ATP6AP1LQ52LC2 224 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 C6orf136Q5SQH8 315 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 APOOLQ6UXV4 268 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ZCCHC23Q6ZST2 131 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 MARCH3Q86UD3 253 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 GRAMD2AQ8IUY3 354 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 MEIOBQ8N635 442 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SLC16A11Q8NCK7 471 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 CLHC1Q8NHS4 586 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 DUSP19Q8WTR2 217 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 PIK3R3Q92569 461 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 FAM120BQ96EK7 910 aaKnown RBP15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 RMND5BQ96G75 393 aaPredicted RBP15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 CXXC4Q9H2H0 198 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ATAD3AQ9NVI7 634 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ASIC5Q9NY37 505 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 MED11Q9P086 117 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ZDHHC2Q9UIJ5 367 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 PACSIN3Q9UKS6 424 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 RPH3AQ9Y2J0 694 aaPredicted RBP15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 AP4B1Q9Y6B7 739 aa15.43■□□□□ 0.06
MAP1LC3B-208ENST00000570189 PRRC2AP48634 2157 aaKnown RBP15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 A0A087WZY1 265 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 A0A1W2PQD3 144 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 OR2M5A3KFT3 312 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 TUBAL3A6NHL2 446 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 EEF1E1-BLOC1S5C9J1V9 151 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 MSTNO14793 375 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 EEF1E1O43324 174 aaKnown RBP15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ZNF500O60304 480 aaPredicted RBP15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 KCNK2O95069 426 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 OXSR1O95747 527 aaPredicted RBP15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 TGM6O95932 706 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SERPINB4P48594 390 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 DIO3P55073 304 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 RAET1LQ5VY80 246 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 CAMKMTQ7Z624 323 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 MISPQ8IVT2 679 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 RIMKLAQ8IXN7 391 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 METTL25Q8N6Q8 603 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ACTRT2Q8TDY3 377 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 INTS12Q96CB8 462 aaKnown RBP15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 COQ8BQ96D53 544 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 C3orf30Q96M34 536 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 POLDIP3Q9BY77 421 aaKnown RBP15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 CLEC4MQ9H2X3 399 aaPredicted RBP15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 EQTNQ9NQ60 294 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ZNF337Q9Y3M9 751 aa15.42■□□□□ 0.06
MAP1LC3B-208ENST00000570189 A0A1W2PNV4 684 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 A8MXE2 369 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 BIRC5O15392 142 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 PEX11AO75192 247 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ALOX5P09917 674 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 PRPS1L1P21108 318 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 PRIM2P49643 509 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ZNF844Q08AG5 666 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 MAD2L1Q13257 205 aaPredicted RBP15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 FGFBP1Q14512 234 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 PTGR1Q14914 329 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 GUSBP1Q15486 140 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 DUSP5Q16690 384 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 TNFAIP8L3Q5GJ75 292 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 LRRC34Q8IZ02 419 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 KIRREL3Q8IZU9 778 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 OR7A2PQ8NGA2 310 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SFXN5Q8TD22 340 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 OR5P2Q8WZ92 322 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 SLC9A6Q92581 669 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 DACH2Q96NX9 599 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 FOXC2Q99958 501 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 GPATCH1Q9BRR8 931 aaKnown RBP15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 RBM24Q9BX46 236 aaKnown RBP15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 BTBD2Q9BX70 525 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 PIGUQ9H490 435 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 NEUROD4Q9HD90 331 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 UBQLN4Q9NRR5 601 aa15.41■□□□□ 0.06
MAP1LC3B-208ENST00000570189 ITGB1BP2Q9UKP3 347 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms