RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 SEC14L5O43304 696 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 NPHS1O60500 1241 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 ATE1O95260 518 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 CHRNGP07510 517 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 ACP2P11117 423 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 ALDH3A1P30838 453 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 KIR2DL2P43627 348 aaPredicted RBP17.04■□□□□ 0.32
SPSB3-210ENST00000568416 PRKAG1P54619 331 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 MANFP55145 182 aaKnown RBP17.04■□□□□ 0.32
SPSB3-210ENST00000568416 CLDN20P56880 219 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 UGT3A2Q3SY77 523 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 VPS26BQ4G0F5 336 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 VWA1Q6PCB0 445 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 TRABD2AQ86V40 505 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 EXOC3L1Q86VI1 746 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 FAM110BQ8TC76 370 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 TWIST2Q8WVJ9 160 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 TRIM44Q96DX7 344 aaPredicted RBP17.04■□□□□ 0.32
SPSB3-210ENST00000568416 MTERF3Q96E29 417 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 PINK1Q9BXM7 581 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 IQCGQ9H095 443 aaKnown RBP17.04■□□□□ 0.32
SPSB3-210ENST00000568416 RNF122Q9H9V4 155 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 ZNF175Q9Y473 711 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 TESMINQ9Y4I5 508 aa17.04■□□□□ 0.32
SPSB3-210ENST00000568416 DOCK7Q96N67 2140 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 A0A1W2PPR1 153 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 TMEM233B4DJY2 109 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 ALG1L2C9J202 215 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 OXSR1O95747 527 aaPredicted RBP17.03■□□□□ 0.32
SPSB3-210ENST00000568416 NGFRP08138 427 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 BCKDHAP12694 445 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 KLK2P20151 261 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 CPOXP36551 454 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 OCRLQ01968 901 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 FAM27E3Q08E93 113 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 POU4F3Q15319 338 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.03■□□□□ 0.32
SPSB3-210ENST00000568416 EXOSC6Q5RKV6 272 aaKnown RBP17.03■□□□□ 0.32
SPSB3-210ENST00000568416 MFSD12Q6NUT3 480 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 BTLAQ7Z6A9 289 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 RIBC1Q8N443 379 aaPredicted RBP17.03■□□□□ 0.32
SPSB3-210ENST00000568416 METTL25Q8N6Q8 603 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 CNEP1R1Q8N9A8 125 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 OR4C3Q8NH37 302 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 SMPDL3BQ92485 455 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 SLC9A6Q92581 669 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 MS4A4EQ96PG1 132 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 MECRQ9BV79 373 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 ANKZF1Q9H8Y5 726 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 SLC17A7Q9P2U7 560 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 NDRG3Q9UGV2 375 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 TRAF6Q9Y4K3 522 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 AP4B1Q9Y6B7 739 aa17.03■□□□□ 0.32
SPSB3-210ENST00000568416 PIP5K1BO14986 540 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 EMC8O43402 210 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 SMNDC1O75940 238 aaKnown RBP eCLIP17.02■□□□□ 0.32
SPSB3-210ENST00000568416 KCNK2O95069 426 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 CGAP01215 116 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 NUDT17P0C025 328 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 ASMTP46597 345 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 MLC1Q15049 377 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 PON3Q15166 354 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 GUSBP1Q15486 140 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 DUSP5Q16690 384 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 DEFB113Q30KQ7 82 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 GALNTL6Q49A17 601 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 ARL13AQ5H913 290 aaPredicted RBP17.02■□□□□ 0.32
SPSB3-210ENST00000568416 ZNF474Q6S9Z5 364 aaPredicted RBP17.02■□□□□ 0.32
SPSB3-210ENST00000568416 ZAR1Q86SH2 424 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 GALNT10Q86SR1 603 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 GGNQ86UU5 652 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 DDIASQ8IXT1 998 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 SLC16A11Q8NCK7 471 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 FBXO30Q8TB52 745 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 FNDC9Q8TBE3 224 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 PGM2Q96G03 612 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 ZNF845Q96IR2 970 aaPredicted RBP17.02■□□□□ 0.32
SPSB3-210ENST00000568416 FAM111AQ96PZ2 611 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 ATP6V1HQ9UI12 483 aa17.02■□□□□ 0.32
SPSB3-210ENST00000568416 MED12Q93074 2177 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 SHISA8B8ZZ34 492 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 CASKO14936 926 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 GMFGO60234 142 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 TBXA2RP21731 343 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 CD79BP40259 229 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 RPS3AP61247 264 aaKnown RBP17.01■□□□□ 0.31
SPSB3-210ENST00000568416 PPP2R2AP63151 447 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 SIRPAP78324 504 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 FOXD4Q12950 439 aaPredicted RBP17.01■□□□□ 0.31
SPSB3-210ENST00000568416 KEAP1Q14145 624 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 ZCCHC12Q6PEW1 402 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 FIGNL1Q6PIW4 674 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 LRIG3Q6UXM1 1119 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 SZRD1Q7Z422 152 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 R3HCC1LQ7Z5L2 792 aaKnown RBP17.01■□□□□ 0.31
SPSB3-210ENST00000568416 OR6Y1Q8NGX8 325 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 C16orf58Q96GQ5 468 aa17.01■□□□□ 0.31
SPSB3-210ENST00000568416 OPN3Q9H1Y3 402 aaPredicted RBP17.01■□□□□ 0.31
SPSB3-210ENST00000568416 EML4Q9HC35 981 aaKnown RBP17.01■□□□□ 0.31
SPSB3-210ENST00000568416 HHATLQ9HCP6 504 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms