RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 CORO2BQ9UQ03 480 aa16.47■□□□□ 0.23
COMMD4-222ENST00000568034 LIPT1Q9Y234 373 aa16.47■□□□□ 0.23
COMMD4-222ENST00000568034 NINQ8N4C6 2090 aa16.47■□□□□ 0.23
COMMD4-222ENST00000568034 DSPPQ9NZW4 1301 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 EVPLLA8MZ36 301 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 HS6ST1O60243 411 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 TRIM3O75382 744 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-222ENST00000568034 STX11O75558 287 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 H6PDO95479 791 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 T-ENOLP0DO92 83 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 ARAFP10398 606 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 ATP6V1C1P21283 382 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 TBXA2RP21731 343 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 DCTP40126 519 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 CHRNEQ04844 493 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 SNTA1Q13424 505 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 INPP5JQ15735 1006 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-222ENST00000568034 FLYWCH1Q4VC44 716 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 PRR30Q53SZ7 412 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-222ENST00000568034 TBCELQ5QJ74 424 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 LRRC74BQ6ZQY2 392 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 CALHM3Q86XJ0 350 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 FAM173AQ9BQD7 235 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 DOHHQ9BU89 302 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 THUMPD3Q9BV44 507 aaKnown RBP16.46■□□□□ 0.23
COMMD4-222ENST00000568034 TMEM38AQ9H6F2 299 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 POLE3Q9NRF9 147 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 CMTM6Q9NX76 183 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 THUMPD1Q9NXG2 353 aaKnown RBP16.46■□□□□ 0.23
COMMD4-222ENST00000568034 TUBA8Q9NY65 449 aaPredicted RBP16.46■□□□□ 0.23
COMMD4-222ENST00000568034 KLRF1Q9NZS2 232 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 MKLN1Q9UL63 735 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 WDR45Q9Y484 360 aa16.46■□□□□ 0.23
COMMD4-222ENST00000568034 ALG1L2C9J202 215 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 KLRC4-KLRK1H3BQV0 150 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 GLSO94925 669 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-222ENST00000568034 RASAL1O95294 804 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 BCHEP06276 602 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 ATP12AP54707 1039 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 CBX1P83916 185 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 GPAT3Q53EU6 434 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 RPS26P11Q5JNZ5 115 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-222ENST00000568034 RNFT1Q5M7Z0 435 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 SLC30A6Q6NXT4 461 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 SERPINA11Q86U17 422 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 SLC15A3Q8IY34 581 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 ZNF619Q8N2I2 560 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 OR10A6Q8NH74 314 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 ZG16BQ96DA0 208 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 TMEM41AQ96HV5 264 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 UBQLN4Q9NRR5 601 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 WIF1Q9Y5W5 379 aa16.45■□□□□ 0.22
COMMD4-222ENST00000568034 C2orf72A6NCS6 295 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 SNPHO15079 494 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 SLC28A2O43868 658 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 UGT2B17O75795 530 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 SNX4O95219 450 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 NR2F1P10589 423 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 RPS4Y1P22090 263 aaKnown RBP16.44■□□□□ 0.22
COMMD4-222ENST00000568034 RFC3P40938 356 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 KCNJ2P63252 427 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 ART3Q13508 389 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 GPR68Q15743 365 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 CD226Q15762 336 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 ZNF141Q15928 474 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 MAPK14Q16539 360 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 KLHL26Q53HC5 615 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 MARCH3Q86UD3 253 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 ZZZ3Q8IYH5 903 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 ZNF843Q8N446 348 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 NSL1Q96IY1 281 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 BARD1Q99728 777 aaKnown RBP16.44■□□□□ 0.22
COMMD4-222ENST00000568034 SH3GL1Q99961 368 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 HOPXQ9BPY8 73 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-222ENST00000568034 TTTY12Q9BZ98 90 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 QRSL1Q9H0R6 528 aaKnown RBP16.44■□□□□ 0.22
COMMD4-222ENST00000568034 GMPR2Q9P2T1 348 aaKnown RBP16.44■□□□□ 0.22
COMMD4-222ENST00000568034 USP22Q9UPT9 525 aa16.44■□□□□ 0.22
COMMD4-222ENST00000568034 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.44■□□□□ 0.22
COMMD4-222ENST00000568034 KALRNO60229 2985 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 C15orf38-AP3S2A0A0A6YYH1 394 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 A0A1W2PQD3 144 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 NME4O00746 187 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 SUV39H1O43463 412 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 SCO2O43819 266 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 WISP2O76076 250 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 UBOX5O94941 541 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 RNF144AP50876 292 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-222ENST00000568034 SLC7A2P52569 658 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 CRISP3P54108 245 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 PSME3P61289 254 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 HPCAP84074 193 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 CDK6Q00534 326 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 PLAURQ03405 335 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 HYAL4Q2M3T9 481 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 PDZK1Q5T2W1 519 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 ZNF324BQ6AW86 544 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-222ENST00000568034 ARPINQ7Z6K5 226 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 HMGN2P46Q86SG4 172 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 SIAH3Q8IW03 269 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms