RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 IL23RQ5VWK5 629 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 ZCCHC12Q6PEW1 402 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 POMZP3Q6PJE2 187 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 CHMP1BQ7LBR1 199 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 CROCCP2Q86T23 111 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 MARCH3Q86UD3 253 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 EXOC3L1Q86VI1 746 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 NATD1Q8N6N6 113 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 FADS6Q8N9I5 356 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 NAXEQ8NCW5 288 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 OR2M3Q8NG83 312 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 OR7A2PQ8NGA2 310 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 GOT1L1Q8NHS2 421 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-209ENST00000567635 MBD3L2Q8NHZ7 208 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-209ENST00000567635 FAM110BQ8TC76 370 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 PIK3R3Q92569 461 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 SLC9A6Q92581 669 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 RNASE6Q93091 150 aaKnown RBP6.27□□□□□ -1.41
SF3B3-209ENST00000567635 WNT2BQ93097 391 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 TUBGCP3Q96CW5 907 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 COQ8BQ96D53 544 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 RMND5BQ96G75 393 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-209ENST00000567635 SFXN2Q96NB2 322 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 ZFP3Q96NJ6 502 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 MS4A4EQ96PG1 132 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 UCN2Q96RP3 112 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 TM9SF2Q99805 663 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 TUBA1CQ9BQE3 449 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 TBL1XR1Q9BZK7 514 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 RTN4RQ9BZR6 473 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 CENPHQ9H3R5 247 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 PTGES2Q9H7Z7 377 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 HHATLQ9HCP6 504 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 KCNK9Q9NPC2 374 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 ATAD3AQ9NVI7 634 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 FLRT3Q9NZU0 649 aa6.27□□□□□ -1.41
SF3B3-209ENST00000567635 FOXD3Q9UJU5 478 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-209ENST00000567635 EIF3LQ9Y262 564 aaKnown RBP6.27□□□□□ -1.41
SF3B3-209ENST00000567635 RPH3AQ9Y2J0 694 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-209ENST00000567635 HEATR1Q9H583 2144 aaKnown RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 CLCA1A8K7I4 914 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 C17orf51A8MQB3 221 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 B4DXG7 233 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 LINC01387J3KSC0 135 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 SCAMP2O15127 329 aaKnown RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 TM9SF1O15321 606 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 ITM2AO43736 263 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 SKAP2O75563 359 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 KCNK2O95069 426 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 RCBTB2O95199 551 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 ZWINTO95229 277 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 ANGPTL1O95841 491 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 NGFRP08138 427 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 MYZAPP0CAP1 466 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 TMIGD3P0DMS9 266 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 ACP2P11117 423 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 PEPDP12955 493 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 ZNF708P17019 499 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 TBXA2RP21731 343 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 TCEA1P23193 301 aaKnown RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 LCN1P31025 176 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 KIR2DL3P43628 341 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 CCT3P49368 545 aaKnown RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 PRIM2P49643 509 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 ASCL1P50553 236 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 DGKQP52824 942 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 DIO3P55073 304 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 CLDN18P56856 261 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 EEFSECP57772 596 aaKnown RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 B3GALT5-AS1P59052 145 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 ABCE1P61221 599 aaKnown RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 EEF1A1P68104 462 aaKnown RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 STX5Q13190 355 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 MAD2L1Q13257 205 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 GANABQ14697 944 aaKnown RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 CHI3L2Q15782 390 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 DUSP5Q16690 384 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 SMU1Q2TAY7 513 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 GRAMD1BQ3KR37 738 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 CEP85LQ5SZL2 805 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 EEF1A1P5Q5VTE0 462 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 MFSD12Q6NUT3 480 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 APOOLQ6UXV4 268 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 SZRD1Q7Z422 152 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 ADGRE4PQ86SQ3 457 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 KIF18BQ86Y91 864 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 C9orf106Q8NAJ2 232 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 FNDC5Q8NAU1 212 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 RELL2Q8NC24 303 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 SLC16A11Q8NCK7 471 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 OR4C3Q8NH37 302 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 OR5P2Q8WZ92 322 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 INTS12Q96CB8 462 aaKnown RBP6.26□□□□□ -1.41
SF3B3-209ENST00000567635 C1GALT1C1Q96EU7 318 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 GIMAP5Q96F15 307 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 PGM2Q96G03 612 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 C16orf58Q96GQ5 468 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 ZIM3Q96PE6 472 aa6.26□□□□□ -1.41
SF3B3-209ENST00000567635 SH3GL2Q99962 352 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms