RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 CHMP6Q96FZ7 201 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 OR2B2Q9GZK3 357 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 ZNF350Q9GZX5 532 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 SAP130Q9H0E3 1048 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 OR51I1Q9H343 314 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 RABEP2Q9H5N1 569 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 RMND5AQ9H871 391 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 SAR1AQ9NR31 198 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 UBQLN4Q9NRR5 601 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 KLRF1Q9NZS2 232 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 SLAMF8Q9P0V8 285 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 KCNE5Q9UJ90 142 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 TRIM33Q9UPN9 1127 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 MRPS18CQ9Y3D5 142 aaKnown RBP11.31□□□□□ -0.6
RNF40-211ENST00000567365 PCDHB14Q9Y5E9 798 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 PCNX1Q96RV3 2341 aa11.31□□□□□ -0.6
RNF40-211ENST00000567365 NAV2Q8IVL1 2488 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 A0A1B0GTH9 108 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 A0A1W2PQD3 144 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 WIPF3A6NGB9 483 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 NR5A2O00482 541 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 AQP7O14520 342 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 HCN1O60741 890 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 SLC19A2O60779 497 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 AK1P00568 194 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 OR12D1P0DN82 309 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 BMP2P12643 396 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 NCF2P19878 526 aaPredicted RBP11.3□□□□□ -0.6
RNF40-211ENST00000567365 DRD4P21917 467 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 LSP1P33241 339 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 CA7P43166 264 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 MASP1P48740 699 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 SEC24CP53992 1094 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 CASP9P55211 416 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 TXNL4AP83876 142 aaKnown RBP11.3□□□□□ -0.6
RNF40-211ENST00000567365 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.3□□□□□ -0.6
RNF40-211ENST00000567365 COX20Q5RI15 118 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.3□□□□□ -0.6
RNF40-211ENST00000567365 ARHGAP11AQ6P4F7 1023 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 TNFAIP8L2Q6P589 184 aaPredicted RBP11.3□□□□□ -0.6
RNF40-211ENST00000567365 DNAJC14Q6Y2X3 702 aaPredicted RBP11.3□□□□□ -0.6
RNF40-211ENST00000567365 MARCH3Q86UD3 253 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 RETREG3Q86VR2 466 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 DPP10Q8N608 796 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 OR2M3Q8NG83 312 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 OR1J4Q8NGS1 313 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 RAB8BQ92930 207 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 RELTQ969Z4 430 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 AURKBQ96GD4 344 aaPredicted RBP11.3□□□□□ -0.6
RNF40-211ENST00000567365 G6PC3Q9BUM1 346 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 NMUR2Q9GZQ4 415 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 TPT1P8Q9HAU6 139 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 SPRR3Q9UBC9 169 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 ERRFI1Q9UJM3 462 aaPredicted RBP11.3□□□□□ -0.6
RNF40-211ENST00000567365 FBXL2Q9UKC9 423 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 OSGIN2Q9Y236 505 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 MYO7BQ6PIF6 2116 aa11.3□□□□□ -0.6
RNF40-211ENST00000567365 SPTBN1Q01082 2364 aaKnown RBP11.3□□□□□ -0.6
RNF40-211ENST00000567365 NCOA6Q14686 2063 aaPredicted RBP11.29□□□□□ -0.6
RNF40-211ENST00000567365 CENPVL1A0A0U1RR11 272 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 OR14I1A6ND48 311 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 SCO2O43819 266 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 ZIC3O60481 467 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 FCMRO60667 390 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 SEMA7AO75326 666 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 CBR3O75828 277 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 AGR2O95994 175 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 ADSLP30566 484 aaPredicted RBP11.29□□□□□ -0.6
RNF40-211ENST00000567365 SRD5A2P31213 254 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 CHI3L1P36222 383 aaPredicted RBP11.29□□□□□ -0.6
RNF40-211ENST00000567365 DCTP40126 519 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 RFX3P48380 749 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 KHKP50053 298 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 ATP12AP54707 1039 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 B3GALT5-AS1P59052 145 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 ELOAQ14241 798 aaKnown RBP11.29□□□□□ -0.6
RNF40-211ENST00000567365 CD226Q15762 336 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 C3AR1Q16581 482 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 KLHL26Q53HC5 615 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 NHSL2Q5HYW2 709 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 TYW3Q6IPR3 259 aaKnown RBP11.29□□□□□ -0.6
RNF40-211ENST00000567365 FRRS1Q6ZNA5 592 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 OLIG3Q7RTU3 272 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 DOLPP1Q86YN1 238 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 C10orf111Q8N326 155 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 FAM83FQ8NEG4 500 aaPredicted RBP11.29□□□□□ -0.6
RNF40-211ENST00000567365 NEIL3Q8TAT5 605 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 DUSP19Q8WTR2 217 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 JSRP1Q96MG2 331 aaPredicted RBP11.29□□□□□ -0.6
RNF40-211ENST00000567365 SLC38A1Q9H2H9 487 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 SLC6A15Q9H2J7 730 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 IKZF5Q9H5V7 419 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 VAPAQ9P0L0 249 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 B4GALT7Q9UBV7 327 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 PCDHGB3Q9Y5G1 929 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 DOPEY2Q9Y3R5 2298 aa11.29□□□□□ -0.6
RNF40-211ENST00000567365 TRGV5A0A0B4J1U4 118 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 NPIPA5A0A0B4J1W7 369 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 NPIPA7E9PJI5 369 aa11.28□□□□□ -0.6
RNF40-211ENST00000567365 FBP2O00757 339 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms