RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 PRDX6P30041 224 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 RFC3P40938 356 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 CRISP3P54108 245 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 CASP9P55211 416 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 RBPJQ06330 500 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 FOXO1Q12778 655 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 RGNQ15493 299 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 KRTCAP3Q53RY4 240 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 ZNF324BQ6AW86 544 aaPredicted RBP11.13□□□□□ -0.63
SF3B3-208ENST00000567250 REP15Q6BDI9 236 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 ARPINQ7Z6K5 226 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 MTERF4Q7Z6M4 381 aaKnown RBP11.13□□□□□ -0.63
SF3B3-208ENST00000567250 GALNT10Q86SR1 603 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 GHDCQ8N2G8 530 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 CCDC197Q8NCU1 140 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 GALNT11Q8NCW6 608 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 ST6GALNAC3Q8NDV1 305 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 PMM1Q92871 262 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 RAB8BQ92930 207 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 MIB2Q96AX9 1013 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 GPR137Q96N19 417 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 ANKRD27Q96NW4 1050 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 TRNT1Q96Q11 434 aaKnown RBP11.13□□□□□ -0.63
SF3B3-208ENST00000567250 SH3GL1Q99961 368 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 CCDC106Q9BWC9 280 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 MYLK2Q9H1R3 596 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 PROK2Q9HC23 129 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 GALNT9Q9HCQ5 603 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 SLC25A37Q9NYZ2 338 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 C15orf41Q9Y2V0 281 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 KCNE3Q9Y6H6 103 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 NINQ8N4C6 2090 aa11.13□□□□□ -0.63
SF3B3-208ENST00000567250 NCKAP5O14513 1909 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 LOC100653049A0A140TA62 436 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 PINLYPA6NC86 204 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 LRRC3CA6NJW4 275 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 FAM166BA8MTA8 275 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 C5orf58C9J3I9 102 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 FBP2O00757 339 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 NDUFAB1O14561 156 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 GNB5O14775 395 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 NDUFB5O43674 189 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 CBR3O75828 277 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 KRT34O76011 436 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 UNC5CO95185 931 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 ANGPTL1O95841 491 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 BCHEP06276 602 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 BMP2P12643 396 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 COX4I1P13073 169 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 ETFAP13804 333 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 GCKP35557 465 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 PTGDSP41222 190 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 TDGF1P3P51864 188 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 MVDP53602 400 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 ATP12AP54707 1039 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 C17orf67Q0P5P2 114 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 FUT5Q11128 374 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 GANABQ14697 944 aaKnown RBP11.12□□□□□ -0.63
SF3B3-208ENST00000567250 COX20Q5RI15 118 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 TIGD3Q6B0B8 471 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 DESI1Q6ICB0 168 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 DLEU7Q6UYE1 221 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 LRRC74BQ6ZQY2 392 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 RETREG3Q86VR2 466 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 PLCZ1Q86YW0 608 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 ZNF619Q8N2I2 560 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 TMEM251Q8N6I4 163 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 METTL25Q8N6Q8 603 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 ZNF614Q8N883 585 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 OR4K17Q8NGC6 315 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 OR8J3Q8NGG0 315 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 PTGES2Q9H7Z7 377 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 ZDHHC11Q9H8X9 412 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 SLAMF8Q9P0V8 285 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 SEC14L3Q9UDX4 400 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 DKKL1Q9UK85 242 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 DTNAQ9Y4J8 743 aa11.12□□□□□ -0.63
SF3B3-208ENST00000567250 SPENQ96T58 3664 aaKnown RBP11.12□□□□□ -0.63
SF3B3-208ENST00000567250 NPIPA5E9PKD4 350 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 CDC40O60508 579 aaKnown RBP eCLIP11.11□□□□□ -0.63
SF3B3-208ENST00000567250 H6PDO95479 791 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 GPX2P18283 190 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 MAGEA5P43359 124 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 TOMM20Q15388 145 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 GPR68Q15743 365 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 ZNF630Q2M218 657 aaPredicted RBP11.11□□□□□ -0.63
SF3B3-208ENST00000567250 RUNDC3AQ59EK9 446 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 GCNT6Q5T4J0 391 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 PRAMEF8Q5VWM4 474 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 PRAMEF7Q5VXH5 474 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 TYW3Q6IPR3 259 aaKnown RBP11.11□□□□□ -0.63
SF3B3-208ENST00000567250 ARHGAP11AQ6P4F7 1023 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 GFRALQ6UXV0 394 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 FRRS1Q6ZNA5 592 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 ZAR1Q86SH2 424 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 SIAH3Q8IW03 269 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 MSRB3Q8IXL7 192 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 POU5F2Q8N7G0 328 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 OR4C3Q8NH37 302 aa11.11□□□□□ -0.63
SF3B3-208ENST00000567250 BCAS4Q8TDM0 211 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms