RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SH3D21A4FU49 640 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 H3BML4 177 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 MSTNO14793 375 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 SEC14L5O43304 696 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 GMFGO60234 142 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 KCNH1O95259 989 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 HRGP04196 525 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 CRHP06850 196 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 FGF4P08620 206 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 ACP2P11117 423 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 CLK3P49761 638 aaKnown RBP16.51■□□□□ 0.23
USB1-213ENST00000566292 PRKAG1P54619 331 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 DIO3P55073 304 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 MANFP55145 182 aaKnown RBP16.51■□□□□ 0.23
USB1-213ENST00000566292 EEF1A1P68104 462 aaKnown RBP16.51■□□□□ 0.23
USB1-213ENST00000566292 EEF1A1P5Q5VTE0 462 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 TGIF2LYQ8IUE0 185 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 CEP70Q8NHQ1 597 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 ZFP28Q8NHY6 868 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 FBXO30Q8TB52 745 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 TWIST2Q8WVJ9 160 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 SLC9A6Q92581 669 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 MBD6Q96DN6 1003 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 ZBED6CLQ96FA7 236 aaPredicted RBP16.51■□□□□ 0.23
USB1-213ENST00000566292 ZNF845Q96IR2 970 aaPredicted RBP16.51■□□□□ 0.23
USB1-213ENST00000566292 FAM111AQ96PZ2 611 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 PIGQQ9BRB3 760 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 PINK1Q9BXM7 581 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 TBL1XR1Q9BZK7 514 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 SLC17A7Q9P2U7 560 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 GIMAP2Q9UG22 337 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 TMED5Q9Y3A6 229 aa16.51■□□□□ 0.23
USB1-213ENST00000566292 SHISA8B8ZZ34 492 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 LINC01387J3KSC0 135 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 PIP5K1BO14986 540 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 NPHS1O60500 1241 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 TNFRSF21O75509 655 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 GOSR1O95249 250 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 ATE1O95260 518 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 CHEK2O96017 543 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 BCKDHAP12694 445 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 CD99P14209 185 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 EFNA1P20827 205 aaPredicted RBP16.5■□□□□ 0.23
USB1-213ENST00000566292 CPOXP36551 454 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 KIR2DL2P43627 348 aaPredicted RBP16.5■□□□□ 0.23
USB1-213ENST00000566292 FAM27E3Q08E93 113 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 C17orf67Q0P5P2 114 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 POU4F3Q15319 338 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 TMEM44Q2T9K0 475 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 GLYR1Q49A26 553 aaPredicted RBP16.5■□□□□ 0.23
USB1-213ENST00000566292 VPS26BQ4G0F5 336 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 ARL13AQ5H913 290 aaPredicted RBP16.5■□□□□ 0.23
USB1-213ENST00000566292 OR2A2Q6IF42 318 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 SZRD1Q7Z422 152 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 BTLAQ7Z6A9 289 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 ZAR1Q86SH2 424 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 DDIASQ8IXT1 998 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 RIBC1Q8N443 379 aaPredicted RBP16.5■□□□□ 0.23
USB1-213ENST00000566292 CNEP1R1Q8N9A8 125 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 CDRT4Q8N9R6 151 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 SLC16A11Q8NCK7 471 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 CHDHQ8NE62 594 aaPredicted RBP16.5■□□□□ 0.23
USB1-213ENST00000566292 OR4C3Q8NH37 302 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 FAM110BQ8TC76 370 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 ALPK1Q96QP1 1244 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 IQCGQ9H095 443 aaKnown RBP16.5■□□□□ 0.23
USB1-213ENST00000566292 ACSS1Q9NUB1 689 aaPredicted RBP16.5■□□□□ 0.23
USB1-213ENST00000566292 EDARQ9UNE0 448 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 TRAF6Q9Y4K3 522 aa16.5■□□□□ 0.23
USB1-213ENST00000566292 ALG1L2C9J202 215 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 EMC8O43402 210 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 SPAG7O75391 227 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 SMNDC1O75940 238 aaKnown RBP eCLIP16.49■□□□□ 0.232e-6■■■■□ 22.6
USB1-213ENST00000566292 KCNK2O95069 426 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 OXSR1O95747 527 aaPredicted RBP16.49■□□□□ 0.23
USB1-213ENST00000566292 RAF1P04049 648 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 NUDT17P0C025 328 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 ARRB2P32121 409 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 EEFSECP57772 596 aaKnown RBP16.49■□□□□ 0.23
USB1-213ENST00000566292 DUSP5Q16690 384 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 EXOSC6Q5RKV6 272 aaKnown RBP16.49■□□□□ 0.23
USB1-213ENST00000566292 MFSD12Q6NUT3 480 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 FIGNL1Q6PIW4 674 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 ZNF474Q6S9Z5 364 aaPredicted RBP16.49■□□□□ 0.23
USB1-213ENST00000566292 ZCCHC23Q6ZST2 131 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 GGNQ86UU5 652 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 FNDC9Q8TBE3 224 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 SMPDL3BQ92485 455 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 MTERF3Q96E29 417 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 OTUB1Q96FW1 271 aaPredicted RBP16.49■□□□□ 0.23
USB1-213ENST00000566292 C16orf58Q96GQ5 468 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 MS4A4EQ96PG1 132 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 OPN3Q9H1Y3 402 aaPredicted RBP16.49■□□□□ 0.23
USB1-213ENST00000566292 SIRT3Q9NTG7 399 aaPredicted RBP16.49■□□□□ 0.23
USB1-213ENST00000566292 FBXO34Q9NWN3 711 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 LGALS13Q9UHV8 139 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 VDAC3Q9Y277 283 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 TESMINQ9Y4I5 508 aa16.49■□□□□ 0.23
USB1-213ENST00000566292 NGFRP08138 427 aa16.48■□□□□ 0.23
USB1-213ENST00000566292 KLK2P20151 261 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms