RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 FOXA2Q9Y261 457 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-205ENST00000566136 CCDC162PA2VCL2 907 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 DPPA5A6NC42 116 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 USP17L23D6RBM5 183 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 SLCO1B7G3V0H7 640 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 LINC01565O15544 149 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 PAPSS2O95340 614 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-205ENST00000566136 PRKACAP17612 351 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 RGRP47804 291 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 THOP1P52888 689 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 RAB11AP62491 216 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 SORDQ00796 357 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 RAB11BQ15907 218 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 CLEC6AQ6EIG7 209 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 DUS1LQ6P1R4 473 aaKnown RBP9.88□□□□□ -0.83
UBFD1-205ENST00000566136 ZNF549Q6P9A3 640 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 DHDDSQ86SQ9 333 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 LUZP2Q86TE4 346 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 GALNT16Q8N428 558 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 KYQ8NBH2 561 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 OR13F1Q8NGS4 319 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 LRRC20Q8TCA0 184 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 SPPL2BQ8TCT7 592 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 PHYHIPQ92561 330 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 EGLN2Q96KS0 407 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 CCDC28BQ9BUN5 200 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 B3GNT3Q9Y2A9 372 aa9.88□□□□□ -0.83
UBFD1-205ENST00000566136 CBY3A6NI87 242 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 PRR23D1E9PI22 279 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 SIVA1O15304 175 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 FCMRO60667 390 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 UPK3AO75631 287 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 RHOBTB1O94844 696 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 ALDOCP09972 364 aaKnown RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 PRR23D2P0DMB1 279 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 SGSHP51688 502 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 DNAJB13P59910 316 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 RNF130Q86XS8 419 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 CPSF7Q8N684 471 aaKnown RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 FAM71CQ8NEG0 241 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 RP9Q8TA86 221 aaKnown RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 SCARB1Q8WTV0 552 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 DAZLQ92904 295 aaKnown RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 TMA16Q96EY4 203 aaKnown RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 ZNF512Q96ME7 567 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 ECSITQ9BQ95 431 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 PDFQ9HBH1 243 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 APMAPQ9HDC9 416 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 DNAJC4Q9NNZ3 241 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 FOXJ3Q9UPW0 622 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 B3GALT5Q9Y2C3 310 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 GRIP1Q9Y3R0 1128 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 KLK4Q9Y5K2 254 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 A0A0A0MQY5 61 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 FITM1A5D6W6 292 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 PRSS46E5RG02 174 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 M0QZ24 198 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 UBFD1O14562 309 aaKnown RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 LIN7AO14910 233 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 STSP08842 583 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 RBP1P09455 135 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 IRF1P10914 325 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 XRCC1P18887 633 aaPredicted RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 TNNI3P19429 210 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 CD80P33681 288 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 SPATS1Q496A3 300 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 GPR157Q5UAW9 335 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 B3GLCTQ6Y288 498 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 GDF7Q7Z4P5 450 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 FAM124AQ86V42 546 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 HCAR2Q8TDS4 363 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 GPX8Q8TED1 209 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 RHBDF1Q96CC6 855 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 NUDT11Q96G61 164 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 CYP2S1Q96SQ9 504 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 GKN1Q9NS71 199 aa9.87□□□□□ -0.83
UBFD1-205ENST00000566136 EXO1Q9UQ84 846 aaKnown RBP9.87□□□□□ -0.83
UBFD1-205ENST00000566136 A0A0U1RQS6 177 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 ATP6AP2A0A1C7CYW4 349 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 SCN2BO60939 215 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 ATP6AP2O75787 350 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 SUPT7LO94864 414 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 FGF1P05230 155 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 ALPIP09923 528 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 ZDHHC11BP0C7U3 371 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 CCL2P13500 99 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 PTGFRP43088 359 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 GPR143P51810 404 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 TIAL1Q01085 375 aaKnown RBP eCLIP9.86□□□□□ -0.83
UBFD1-205ENST00000566136 GNA12Q03113 381 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 PMS2P3Q13401 168 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 PTPRRQ15256 657 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 CTU2Q2VPK5 515 aaKnown RBP9.86□□□□□ -0.83
UBFD1-205ENST00000566136 SFT2D3Q587I9 215 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 RBM23Q86U06 439 aaKnown RBP9.86□□□□□ -0.83
UBFD1-205ENST00000566136 ISCA2Q86U28 154 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 TMPRSS12Q86WS5 348 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 SVOPQ8N4V2 548 aa9.86□□□□□ -0.83
UBFD1-205ENST00000566136 AMER2Q8N7J2 671 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms