RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 FOLH1BQ9HBA9 442 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 GLRX2Q9NS18 164 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 MED11Q9P086 117 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 PCTPQ9UKL6 214 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 TMCO1Q9UM00 188 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 EMC9Q9Y3B6 208 aa11.42□□□□□ -0.58
RNF40-208ENST00000565995 ATP8B1O43520 1251 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 C8BP07358 591 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 THBS2P35442 1172 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 IFT88Q13099 833 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 CHRFAM7AQ494W8 412 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 CYP27C1Q4G0S4 372 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 TECRLQ5HYJ1 363 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 NCMAPQ5T1S8 102 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 RAET1LQ5VY80 246 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 TTC19Q6DKK2 380 aaPredicted RBP11.41□□□□□ -0.58
RNF40-208ENST00000565995 FAM180BQ6P0A1 224 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 EXOC3L1Q86VI1 746 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 OR4N2Q8NGD1 307 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 ATP6V1E2Q96A05 226 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 EFHD2Q96C19 240 aaPredicted RBP11.41□□□□□ -0.58
RNF40-208ENST00000565995 C11orf24Q96F05 449 aaPredicted RBP11.41□□□□□ -0.58
RNF40-208ENST00000565995 ADGRG7Q96K78 797 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 HDHD5Q9BXW7 423 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 SHCBP1LQ9BZQ2 653 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 RTN4RQ9BZR6 473 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 ACTR6Q9GZN1 396 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 LRTM1Q9HBL6 345 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 FARSBQ9NSD9 589 aaKnown RBP11.41□□□□□ -0.58
RNF40-208ENST00000565995 NMRK1Q9NWW6 199 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 TMEM160Q9NX00 188 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 FAM120CQ9NX05 1096 aaKnown RBP11.41□□□□□ -0.58
RNF40-208ENST00000565995 PAQR5Q9NXK6 330 aaPredicted RBP11.41□□□□□ -0.58
RNF40-208ENST00000565995 TAS2R9Q9NYW1 312 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 STOML1Q9UBI4 398 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 LGALS13Q9UHV8 139 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 UTS2RQ9UKP6 389 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 ARFGEF3Q5TH69 2177 aa11.41□□□□□ -0.58
RNF40-208ENST00000565995 NUP214P35658 2090 aaPredicted RBP11.4□□□□□ -0.58
RNF40-208ENST00000565995 A8MV72 311 aaPredicted RBP11.4□□□□□ -0.58
RNF40-208ENST00000565995 H3BML4 177 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 PHF1O43189 567 aaPredicted RBP11.4□□□□□ -0.58
RNF40-208ENST00000565995 SEC14L5O43304 696 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 PDYNP01213 254 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 SOD3P08294 240 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 FAM157CP0CG43 387 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 TCEA1P23193 301 aaKnown RBP11.4□□□□□ -0.58
RNF40-208ENST00000565995 TYK2P29597 1187 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 ACVR1BP36896 505 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 RASA2Q15283 850 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 EXOC3L2Q2M3D2 409 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 KLC3Q6P597 504 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 SLC44A2Q8IWA5 706 aaPredicted RBP11.4□□□□□ -0.58
RNF40-208ENST00000565995 CNPY4Q8N129 248 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 OR4F6Q8NGB9 312 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 RAB3IL1Q8TBN0 382 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 DUSP19Q8WTR2 217 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 KAT2AQ92830 837 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 FBXW5Q969U6 566 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 ZBED6CLQ96FA7 236 aaPredicted RBP11.4□□□□□ -0.58
RNF40-208ENST00000565995 VPS11Q9H270 941 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 ELOVL6Q9H5J4 265 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 YAE1D1Q9NRH1 226 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 CPSF2Q9P2I0 782 aaKnown RBP11.4□□□□□ -0.58
RNF40-208ENST00000565995 MCM8Q9UJA3 840 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 SLC12A4Q9UP95 1085 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 RNF115Q9Y4L5 304 aa11.4□□□□□ -0.58
RNF40-208ENST00000565995 A0A087WV62 115 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 A0A096LNT2 108 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 A0A096LPK6 155 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 GOLGA8RI6L899 631 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 ADAMDEC1O15204 470 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 SCO2O43819 266 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 NME6O75414 186 aaPredicted RBP11.39□□□□□ -0.59
RNF40-208ENST00000565995 GCM2O75603 506 aaPredicted RBP11.39□□□□□ -0.59
RNF40-208ENST00000565995 IGHV4-39P01824 125 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 HSD3B1P14060 373 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 HSD3B2P26439 372 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 SLC6A8P48029 635 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 ALDH9A1P49189 494 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 CTBP2P56545 445 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 C17orf67Q0P5P2 114 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 SGCBQ16585 318 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 CTU2Q2VPK5 515 aaKnown RBP11.39□□□□□ -0.59
RNF40-208ENST00000565995 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.39□□□□□ -0.59
RNF40-208ENST00000565995 WFDC8Q8IUA0 241 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 C4orf33Q8N1A6 199 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 C1orf52Q8N6N3 182 aaKnown RBP11.39□□□□□ -0.59
RNF40-208ENST00000565995 PTGR2Q8N8N7 351 aaPredicted RBP11.39□□□□□ -0.59
RNF40-208ENST00000565995 STEAP2Q8NFT2 490 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 OR7G2Q8NG99 324 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 OR5M1Q8NGP8 315 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 OR9A2Q8NGT5 310 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 SMAP2Q8WU79 429 aaPredicted RBP11.39□□□□□ -0.59
RNF40-208ENST00000565995 GTPBP3Q969Y2 492 aaKnown RBP11.39□□□□□ -0.59
RNF40-208ENST00000565995 NSUN5Q96P11 429 aaKnown RBP11.39□□□□□ -0.59
RNF40-208ENST00000565995 C1QTNF3Q9BXJ4 246 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 TMBIM4Q9HC24 238 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 VPS29Q9UBQ0 182 aa11.39□□□□□ -0.59
RNF40-208ENST00000565995 LIPT1Q9Y234 373 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms