RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 FASP25445 335 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 GDF1P27539 372 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 CDH5P33151 784 aaPredicted RBP3.35□□□□□ -1.87
CHD9-215ENST00000565442 RPL4P36578 427 aaKnown RBP3.35□□□□□ -1.87
CHD9-215ENST00000565442 MAGEA5P43359 124 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 SLC25A1P53007 311 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 PEX6Q13608 980 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 CYP51A1Q16850 503 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 LINC01620Q4KN68 170 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 TMEM41BQ5BJD5 291 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 CGB2Q6NT52 195 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 SCYL2Q6P3W7 929 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 LRRC8BQ6P9F7 803 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 CBLN3Q6UW01 205 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 LANCL3Q6ZV70 420 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 HSD11B1LQ7Z5J1 315 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 GRAMD2AQ8IUY3 354 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 CENPLQ8N0S6 344 aaPredicted RBP3.35□□□□□ -1.87
CHD9-215ENST00000565442 GPD1LQ8N335 351 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 CCDC26Q8TAB7 109 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 ADAMTS16Q8TE57 1224 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 OR5M11Q96RB7 305 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 ELOVL4Q9GZR5 314 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 POLR3FQ9H1D9 316 aaPredicted RBP3.35□□□□□ -1.87
CHD9-215ENST00000565442 RHOJQ9H4E5 214 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 DHX33Q9H6R0 707 aaKnown RBP3.35□□□□□ -1.87
CHD9-215ENST00000565442 WDR76Q9H967 626 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 CALHM2Q9HA72 323 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 POLD4Q9HCU8 107 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 SLC35D1Q9NTN3 355 aa3.35□□□□□ -1.87
CHD9-215ENST00000565442 IGHV3-35A0A0C4DH35 117 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 DUX1O43812 170 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 JAK2O60674 1132 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 RAMP1O60894 148 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 PTMAP06454 111 aaKnown RBP3.34□□□□□ -1.87
CHD9-215ENST00000565442 H2AFXP16104 143 aaPredicted RBP3.34□□□□□ -1.87
CHD9-215ENST00000565442 KIF5BP33176 963 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 MDH2P40926 338 aaKnown RBP3.34□□□□□ -1.87
CHD9-215ENST00000565442 XCR1P46094 333 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 KLHL30Q0D2K2 578 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 TGIF1Q15583 401 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 MAPK6Q16659 721 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 GSG1Q2KHT4 349 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 QRICH1Q2TAL8 776 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 PAN3Q58A45 887 aaKnown RBP3.34□□□□□ -1.87
CHD9-215ENST00000565442 C2orf66Q6UXQ4 117 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 STAC2Q6ZMT1 411 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 Q6ZR54 194 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 LRRC70Q7Z2Q7 622 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 LINC00612Q8N6U2 182 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 OR5AU1Q8NGC0 362 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 M1APQ8TC57 530 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 RSPH1Q8WYR4 309 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 CASD1Q96PB1 797 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 IKZF5Q9H5V7 419 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 PALMDQ9NP74 551 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 GALPQ9UBC7 116 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 SH3BGRL2Q9UJC5 107 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 RNF6Q9Y252 685 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 KIF3AQ9Y496 699 aa3.34□□□□□ -1.87
CHD9-215ENST00000565442 SAGE2PA6NJ88 616 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 CHRNA1P02708 482 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 CSF2P04141 144 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 KRT6BP04259 564 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 H2AFZP0C0S5 128 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 KRT13P13646 458 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 IGHV1-2P23083 117 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 GNPDA1P46926 289 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 KRT6CP48668 564 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 RPL8P62917 257 aaKnown RBP3.33□□□□□ -1.88
CHD9-215ENST00000565442 RGS1Q08116 209 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 OVGP1Q12889 678 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 ASAH1Q13510 395 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 SLC22A10Q63ZE4 541 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 BAIAP2L2Q6UXY1 529 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 IFNEQ86WN2 208 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 HSCBQ8IWL3 235 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 C9orf40Q8IXQ3 194 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 CSNK1A1LQ8N752 337 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 FADS6Q8N9I5 356 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 ZSCAN4Q8NAM6 433 aaPredicted RBP3.33□□□□□ -1.88
CHD9-215ENST00000565442 OR2T33Q8NG76 320 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 OR10T2Q8NGX3 314 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 CNIH3Q8TBE1 160 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 ZPLD1Q8TCW7 415 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 MRAPQ8TCY5 172 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 AKR1E2Q96JD6 320 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 C4orf36Q96KX1 117 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 SIGLEC12Q96PQ1 595 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 TSSK1BQ9BXA7 367 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 COG4Q9H9E3 785 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 EHFQ9NZC4 300 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 Q9UF83 564 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 GMPPBQ9Y5P6 360 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 CARMIL1Q5VZK9 1371 aa3.33□□□□□ -1.88
CHD9-215ENST00000565442 CFAP65Q6ZU64 1925 aaKnown RBP3.32□□□□□ -1.88
CHD9-215ENST00000565442 MAPK13O15264 365 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 STX7O15400 261 aaKnown RBP3.32□□□□□ -1.88
CHD9-215ENST00000565442 EFNA2O43921 213 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 PEX11AO75192 247 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms