RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 C3orf14Q9HBI5 128 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 EML4Q9HC35 981 aaKnown RBP9.06□□□□□ -0.96
CMTM3-209ENST00000565003 SDHAF3Q9NRP4 125 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 SIRT3Q9NTG7 399 aaPredicted RBP9.06□□□□□ -0.96
CMTM3-209ENST00000565003 ACSS1Q9NUB1 689 aaPredicted RBP9.06□□□□□ -0.96
CMTM3-209ENST00000565003 GALNT8Q9NY28 637 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 MRTO4Q9UKD2 239 aaKnown RBP9.06□□□□□ -0.96
CMTM3-209ENST00000565003 ZNF337Q9Y3M9 751 aa9.06□□□□□ -0.96
CMTM3-209ENST00000565003 MED13LQ71F56 2210 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 IGLV3-32A0A0A0MS00 114 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 A0A1W2PNV4 684 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 OR2M5A3KFT3 312 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 SLC22A20A6NK97 555 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 TTC36A6NLP5 189 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 TMEM114B3SHH9 223 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 SHISA8B8ZZ34 492 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 ALG1L2C9J202 215 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 H3BML4 177 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 SCAMP2O15127 329 aaKnown RBP9.05□□□□□ -0.96
CMTM3-209ENST00000565003 TYROBPO43914 113 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 PEX11AO75192 247 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 SKAP2O75563 359 aaPredicted RBP9.05□□□□□ -0.96
CMTM3-209ENST00000565003 KCNK2O95069 426 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 SLU7O95391 586 aaKnown RBP9.05□□□□□ -0.96
CMTM3-209ENST00000565003 OXSR1O95747 527 aaPredicted RBP9.05□□□□□ -0.96
CMTM3-209ENST00000565003 ANGPTL1O95841 491 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 BPGMP07738 259 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 PEPDP12955 493 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 SERPINB5P36952 375 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 HPCAL1P37235 193 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 CLK3P49761 638 aaKnown RBP9.05□□□□□ -0.96
CMTM3-209ENST00000565003 ART1P52961 327 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 IST1P53990 364 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 CLDN20P56880 219 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 PTGR1Q14914 329 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 DAZAP2Q15038 168 aaPredicted RBP9.05□□□□□ -0.96
CMTM3-209ENST00000565003 TMEM44Q2T9K0 475 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 VPS26BQ4G0F5 336 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 ATP6AP1LQ52LC2 224 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 EXOSC6Q5RKV6 272 aaKnown RBP9.05□□□□□ -0.96
CMTM3-209ENST00000565003 FIGNL1Q6PIW4 674 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 R3HCC1LQ7Z5L2 792 aaKnown RBP9.05□□□□□ -0.96
CMTM3-209ENST00000565003 CDC20BQ86Y33 519 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 KIF18BQ86Y91 864 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 MEIOBQ8N635 442 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 GATSQ8NAP1 163 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 OR7A2PQ8NGA2 310 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 CEP70Q8NHQ1 597 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 NUDT8Q8WV74 236 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 FIG4Q92562 907 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 FAM120BQ96EK7 910 aaKnown RBP9.05□□□□□ -0.96
CMTM3-209ENST00000565003 PKNOX2Q96KN3 472 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 KLHDC3Q9BQ90 382 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 YIPF4Q9BSR8 244 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 ACBD3Q9H3P7 528 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 PTGES2Q9H7Z7 377 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 CCM2LQ9NUG4 571 aaPredicted RBP9.05□□□□□ -0.96
CMTM3-209ENST00000565003 FBXO34Q9NWN3 711 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 ATP6V1HQ9UI12 483 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 ZDHHC2Q9UIJ5 367 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 PACSIN3Q9UKS6 424 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 ABCA4P78363 2273 aa9.05□□□□□ -0.96
CMTM3-209ENST00000565003 HAX1O00165 279 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 SEC14L5O43304 696 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 EMC8O43402 210 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 LYPLA1O75608 230 aaPredicted RBP9.04□□□□□ -0.96
CMTM3-209ENST00000565003 HMGN2P05204 90 aaKnown RBP9.04□□□□□ -0.96
CMTM3-209ENST00000565003 NGFRP08138 427 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 LAMP1P11279 417 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 EPXP11678 715 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 MAPK1P28482 360 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 CPOXP36551 454 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 CPA2P48052 419 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 ZNF844Q08AG5 666 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 C17orf67Q0P5P2 114 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 MLC1Q15049 377 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.04□□□□□ -0.96
CMTM3-209ENST00000565003 C6orf136Q5SQH8 315 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 CCNJQ5T5M9 372 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 IL23RQ5VWK5 629 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 VWA1Q6PCB0 445 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 LRIG3Q6UXM1 1119 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 CHMP1BQ7LBR1 199 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 P4HA3Q7Z4N8 544 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 GGNQ86UU5 652 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 KRTCAP2Q8N6L1 136 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 COX18Q8N8Q8 333 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 FNDC5Q8NAU1 212 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 FAM110BQ8TC76 370 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 SMPDL3BQ92485 455 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 JADE3Q92613 823 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 NINJ1Q92982 152 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 STARD4Q96DR4 205 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 ZNF845Q96IR2 970 aaPredicted RBP9.04□□□□□ -0.96
CMTM3-209ENST00000565003 NPAS1Q99742 590 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 PIGQQ9BRB3 760 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 TMEM109Q9BVC6 243 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 PINK1Q9BXM7 581 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 PIGMQ9H3S5 423 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 ZCCHC3Q9NUD5 404 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms