RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 STON1Q9Y6Q2 735 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 HELZP42694 1942 aaKnown RBP15.26■□□□□ 0.03
LINC00554-201ENST00000564841 LILRB3O75022 631 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 SOX30O94993 753 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 HLA-DPB1P04440 258 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 ACP2P11117 423 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 F8A1P23610 371 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 PREPP48147 710 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 DSG2Q14126 1118 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 ANXA8L1Q5VT79 327 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 CRTC1Q6UUV9 634 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 FAM198BQ6UWH4 519 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 NHLRC1Q6VVB1 395 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 NXPE1Q8N323 547 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 SLC38A5Q8WUX1 472 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 APOBEC4Q8WW27 367 aaKnown RBP15.26■□□□□ 0.03
LINC00554-201ENST00000564841 SERHL2Q9H4I8 314 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 ESRP2Q9H6T0 727 aaKnown RBP15.26■□□□□ 0.03
LINC00554-201ENST00000564841 AUNIPQ9H7T9 357 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 ZDHHC4Q9NPG8 344 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 COPZ2Q9P299 210 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 ATG2BQ96BY7 2078 aa15.26■□□□□ 0.03
LINC00554-201ENST00000564841 SPTBN5Q9NRC6 3674 aaKnown RBP15.25■□□□□ 0.03
LINC00554-201ENST00000564841 TMEM129A0AVI4 362 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 ZC3H12DA2A288 527 aaKnown RBP15.25■□□□□ 0.03
LINC00554-201ENST00000564841 L7N2F9 121 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 GMDSO60547 372 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 EGFP01133 1207 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 DGKGP49619 791 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 NAE1Q13564 534 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 HSD17B12Q53GQ0 312 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 OR5M10Q6IEU7 315 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 TRIM40Q6P9F5 258 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 Q6ZVU0 165 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 OVCH2Q7RTZ1 564 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 HORMAD2Q8N7B1 307 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 RELL2Q8NC24 303 aaPredicted RBP15.25■□□□□ 0.03
LINC00554-201ENST00000564841 ALG14Q96F25 216 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 OR51B5Q9H339 312 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 KLHL1Q9NR64 748 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 C5AR2Q9P296 337 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 OR51B4Q9Y5P0 310 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 TRIOO75962 3097 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 SLC19A2O60779 497 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 TGFB1P01137 390 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 VEGFCP49767 419 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 MEF2AQ02078 507 aaPredicted RBP15.25■□□□□ 0.03
LINC00554-201ENST00000564841 RNLSQ5VYX0 342 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 ASTLQ6HA08 431 aaPredicted RBP15.25■□□□□ 0.03
LINC00554-201ENST00000564841 Q6ZNB5 142 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 OAFQ86UD1 273 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 FGF11Q92914 225 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 YIPF5Q969M3 257 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 NRTNQ99748 197 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 PHF11Q9UIL8 331 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 LHX6Q9UPM6 363 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 RNASET2O00584 256 aaKnown RBP15.25■□□□□ 0.03
LINC00554-201ENST00000564841 GRM6O15303 877 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 ARAFP10398 606 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 PTGER1P34995 402 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 THBS2P35442 1172 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 C1orf53Q5VUE5 145 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 FAM109BQ6ICB4 259 aaPredicted RBP15.25■□□□□ 0.03
LINC00554-201ENST00000564841 FAAP20Q6NZ36 180 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 DCAF4L2Q8NA75 395 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 CLRN3Q8NCR9 226 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 BVESQ8NE79 360 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 OR4K5Q8NGD3 323 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 SMAP2Q8WU79 429 aaPredicted RBP15.25■□□□□ 0.03
LINC00554-201ENST00000564841 TMEM19Q96HH6 336 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 POLMQ9NP87 494 aaPredicted RBP15.25■□□□□ 0.03
LINC00554-201ENST00000564841 ERVK-19Q9WJR5 959 aa15.25■□□□□ 0.03
LINC00554-201ENST00000564841 A0A1B0GVI7 797 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 OR2W5A6NFC9 320 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 ANKDD1BA6NHY2 528 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 KIAA0355O15063 1070 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 CASC3O15234 703 aaKnown RBP15.24■□□□□ 0.03
LINC00554-201ENST00000564841 SLC2A10O95528 541 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 RHOP08100 348 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 MMP12P39900 470 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 TMEM88Q6PEY1 159 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 MACC1Q6ZN28 852 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 ZNF454Q8N9F8 522 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 BBS10Q8TAM1 723 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 SLC12A9Q9BXP2 914 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 EVA1AQ9H8M9 152 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 CNIH4Q9P003 139 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 ANGPT4Q9Y264 503 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 SLC9B1P1A6NJY1 282 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 FAM183AA6NL82 134 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 ARPC5O15511 151 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 FZD7O75084 574 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 ATP6V1E1P36543 226 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 SPAM1P38567 509 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 TAP2Q03519 686 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 FZD5Q13467 585 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 LY6G5CQ5SRR4 150 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 LILRA6Q6PI73 481 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 CHST14Q8NCH0 376 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 RPLP0P6Q8NHW5 317 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms