RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 FAM111BQ6SJ93 734 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 KLHL17Q6TDP4 642 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 AHSA2Q719I0 299 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR4N5Q8IXE1 308 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ENTHD1Q8IYW4 607 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF540Q8NDQ6 660 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF675Q8TD23 568 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RAB2BQ8WUD1 216 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FCGR1BQ92637 280 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RORBQ92753 470 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CDS1Q92903 461 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MYDGFQ969H8 173 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FKBP10Q96AY3 582 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GIMAP5Q96F15 307 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TCTN2Q96GX1 697 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CD180Q99467 661 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DOK1Q99704 481 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ARHGDIGQ99819 225 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 NIPSNAP1Q9BPW8 284 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 UCK2Q9BZX2 261 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 NRSN2Q9GZP1 204 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC38A1Q9H2H9 487 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DUSP21Q9H596 190 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CCDC86Q9H6F5 360 aaKnown RBP6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RASSF1Q9NS23 344 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PAK1IP1Q9NWT1 392 aaPredicted RBP6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OCIAD1Q9NX40 245 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC39A1Q9NY26 324 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ERVK-18Q9QC07 812 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 EPHA6Q9UF33 1036 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CDC14AQ9UNH5 594 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 C19orf53Q9UNZ5 99 aaPredicted RBP6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RNF6Q9Y252 685 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MRPS33Q9Y291 106 aaKnown RBP6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 IFT52Q9Y366 437 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PCDHGA6Q9Y5G7 932 aa6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 URB1O60287 2271 aaKnown RBP6.92□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SH3PXD2BA1X283 911 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC9B1P1A6NJY1 282 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FAM227AF5H4B4 570 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 H3BMQ9 156 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SGK494L7N484 410 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CYR61O00622 381 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PLOD3O60568 738 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SRPX2O60687 465 aaPredicted RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 NME6O75414 186 aaPredicted RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 WBP4O75554 376 aaKnown RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FADS2O95864 444 aaKnown RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ACP2P11117 423 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RNH1P13489 461 aaKnown RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OSMP13725 252 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 POU2F1P14859 743 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CCNA2P20248 432 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 IFNGR2P38484 337 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RGS8P57771 180 aaPredicted RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TAS2R41P59536 307 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SNRPNP63162 240 aaKnown RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ID2Q02363 134 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CHRNEQ04844 493 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PIGFQ07326 219 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF155Q12901 538 aaPredicted RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FOXD4Q12950 439 aaPredicted RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 KCNAB1Q14722 419 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RTP5Q14D33 572 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 LARS2Q15031 903 aaKnown RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TRAM2Q15035 370 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 NPTX1Q15818 432 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 COL28A1Q2UY09 1125 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PRTGQ2VWP7 1150 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ARHGAP11BQ3KRB8 267 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GTF2IRD2BQ6EKJ0 949 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PGBD2Q6P3X8 592 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZCCHC12Q6PEW1 402 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CCDC81Q6ZN84 652 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FRRS1Q6ZNA5 592 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 Q6ZPB1 254 aaPredicted RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PLEKHM3Q6ZWE6 761 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OLIG3Q7RTU3 272 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PRSS48Q7RTY5 328 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PRSS41Q7RTY9 318 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PRSS42Q7Z5A4 293 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ARHGAP22Q7Z5H3 698 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GTF2IRD2Q86UP8 949 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RBM45Q8IUH3 476 aaKnown RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 LACC1Q8IV20 430 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CCDC71Q8IV32 467 aaPredicted RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MCATQ8IVS2 390 aaKnown RBP6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PEX5LQ8IYB4 626 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 COX18Q8N8Q8 333 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CDRT4Q8N9R6 151 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR5T3Q8NGG3 340 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR4D11Q8NGI4 311 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR52P1PQ8NH57 321 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 APH1BQ8WW43 257 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC9A6Q92581 669 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SGCDQ92629 289 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC38A4Q969I6 547 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC35A4Q96G79 324 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 COG8Q96MW5 612 aa6.91□□□□□ -1.3
MAP1LC3B-205ENST00000564638 STACQ99469 402 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms