RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 C1GALT1C1Q96EU7 318 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 SORT1Q99523 831 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 CLCF1Q9UBD9 225 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 ZNF629Q9UEG4 869 aaPredicted RBP18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 KCNN3Q9UGI6 736 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 EIF3LQ9Y262 564 aaKnown RBP18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 SNX8Q9Y5X2 465 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 CSMD2Q7Z408 3487 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 PCNX3Q9H6A9 2034 aa18.08■□□□□ 0.48
SHCBP1-203ENST00000564272 TACC2O95359 2948 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 KCNK2O95069 426 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 ZWINTO95229 277 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 OXSR1O95747 527 aaPredicted RBP18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 C6orf47O95873 294 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 HMGN2P05204 90 aaKnown RBP18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 TMIGD3P0DMS9 266 aaPredicted RBP18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 CTSSP25774 331 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 GANABQ14697 944 aaKnown RBP18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 LASP1Q14847 261 aaKnown RBP18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 CCNJQ5T5M9 372 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 ARSKQ6UWY0 536 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 RIMKLAQ8IXN7 391 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 COX18Q8N8Q8 333 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 GATSQ8NAP1 163 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 PGM2Q96G03 612 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 CXorf36Q9H7Y0 433 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 ATAD3AQ9NVI7 634 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 FBXO34Q9NWN3 711 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 RAP2CQ9Y3L5 183 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 ACTL7BQ9Y614 415 aa18.07■□□□□ 0.48
SHCBP1-203ENST00000564272 EEF1E1-BLOC1S5C9J1V9 151 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 SYT5O00445 386 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 EEF1E1O43324 174 aaKnown RBP18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 POU3F2P20265 443 aaPredicted RBP18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 PRPS1L1P21108 318 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 SLC1A6P48664 564 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 PRIM2P49643 509 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 EMX2Q04743 252 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 FOXF2Q12947 444 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 ZCCHC12Q6PEW1 402 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 ZZZ3Q8IYH5 903 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 UBQLNLQ8IYU4 475 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 ANKRD42Q8N9B4 389 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 OR4C3Q8NH37 302 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 FAM110BQ8TC76 370 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 OR5P2Q8WZ92 322 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 CDS1Q92903 461 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 RNASE6Q93091 150 aaKnown RBP18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 COQ8BQ96D53 544 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 CHMP6Q96FZ7 201 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 PAIP2Q9BPZ3 127 aaKnown RBP18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 PTGES2Q9H7Z7 377 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 AKTIPQ9H8T0 292 aa18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 NOP53Q9NZM5 478 aaKnown RBP18.06■□□□□ 0.48
SHCBP1-203ENST00000564272 OTOGQ6ZRI0 2925 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 IGLV3-32A0A0A0MS00 114 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 SHISA8B8ZZ34 492 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 TUBBP07437 444 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 MYZAPP0CAP1 466 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 OPRM1P35372 400 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 CCT3P49368 545 aaKnown RBP18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 DIO3P55073 304 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 MAD2L1Q13257 205 aaPredicted RBP18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 TP53BP2Q13625 1128 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 FBXL19-AS1Q494R0 122 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 SPDYE7PQ495Y7 208 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 TMEM200AQ86VY9 491 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 GRAMD2AQ8IUY3 354 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 GCNT2Q8N0V5 402 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 PSMA8Q8TAA3 256 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 WNT2BQ93097 391 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 INTS12Q96CB8 462 aaKnown RBP18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 UCN2Q96RP3 112 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 PRPF18Q99633 342 aaKnown RBP18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 TM9SF2Q99805 663 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 DUSP26Q9BV47 211 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 BHLHE41Q9C0J9 482 aaPredicted RBP18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 SLC24A3Q9HC58 644 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 ASIC5Q9NY37 505 aa18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 ANKHD1Q8IWZ3 2542 aaKnown RBP18.05■□□□□ 0.48
SHCBP1-203ENST00000564272 MED12LQ86YW9 2145 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 NUP214P35658 2090 aaPredicted RBP18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 OR2M5A3KFT3 312 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 ALG1L2C9J202 215 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 H0YC42 278 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 H3BML4 177 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 SEC14L5O43304 696 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 HCRTR2O43614 444 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 IL18BPO95998 194 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 NGFRP08138 427 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 PEPDP12955 493 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 CAPN3P20807 821 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 RPL14P50914 215 aaKnown RBP18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 TPD52P55327 224 aaPredicted RBP18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 CLDN8P56748 225 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 C21orf58P58505 322 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 POU6F2P78424 691 aaPredicted RBP18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 C17orf67Q0P5P2 114 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 BCL2A1Q16548 175 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms