RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 NPAS2Q99743 824 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 ATF6BQ99941 703 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 MAGT1Q9H0U3 335 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 UPF3AQ9H1J1 476 aaKnown RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 TUBB1Q9H4B7 451 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 RAB18Q9NP72 206 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 ABCC13Q9NSE7 274 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 UFSP2Q9NUQ7 469 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 NUDT4Q9NZJ9 180 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 CTNNA3Q9UI47 895 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 PTBP2Q9UKA9 531 aaKnown RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 CLEC4AQ9UMR7 237 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 RPH3ALQ9UNE2 315 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 CPQQ9Y646 472 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 CECR2Q9BXF3 1484 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 TEX48A0A1B0GUV7 120 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 PDHXO00330 501 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 CASKO14936 926 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 ZNF264O43296 627 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 F10P00742 488 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 LAP3P28838 519 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 RPL23AP62750 156 aaKnown RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 DPYSL3Q14195 570 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 C14orf28Q4W4Y0 310 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 TPGS2Q68CL5 300 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 ARMCX5Q6P1M9 558 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 Q6ZPB1 254 aaPredicted RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 NLRP9Q7RTR0 991 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 EFL1Q7Z2Z2 1120 aaKnown RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 TMEM17Q86X19 198 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 RNF130Q86XS8 419 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 LRRC75A-AS1Q8N1F1 130 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 BPIFB2Q8N4F0 458 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 ARL14Q8N4G2 192 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 ZSCAN4Q8NAM6 433 aaPredicted RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 OR1F12Q8NHA8 337 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 M1APQ8TC57 530 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 NPRL2Q8WTW4 380 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 SLC45A3Q96JT2 553 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 LINC00479Q96M42 142 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 C12orf66Q96MD2 445 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 SLC6A7Q99884 636 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 CAPS2Q9BXY5 557 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 DUSP16Q9BY84 665 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 GCOM2Q9BZD3 368 aaPredicted RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 RNF41Q9H4P4 317 aaPredicted RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 AMBNQ9NP70 447 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 NMRK1Q9NWW6 199 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 SIGLEC8Q9NYZ4 499 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 ZNF221Q9UK13 617 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 MGAT4AQ9UM21 535 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 NSD2O96028 1365 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 IGHV3OR16-12A0A075B7B8 117 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 NPIPA7E9PJI5 369 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 H0Y8G0 127 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 FCMRO60667 390 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 NPIPA8P0DM63 369 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 SPRP35270 261 aaPredicted RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 CASP4P49662 377 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 SNAI3Q3KNW1 292 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 MS4A13Q5J8X5 152 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 FAM120AOSQ5T036 256 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 PMF1Q6P1K2 205 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 PRSS48Q7RTY5 328 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 IFNEQ86WN2 208 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 VSTM4Q8IW00 320 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 C15orf54Q8N8G6 183 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 BADQ92934 168 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 RAB3CQ96E17 227 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 C9orf85Q96MD7 179 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 NPY6RQ99463 290 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 TMEM43Q9BTV4 400 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 GON7Q9BXV9 100 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 FAM120CQ9NX05 1096 aaKnown RBP2.08□□□□□ -2.08
CHD9-209ENST00000564255 NPIPA1Q9UND3 350 aa2.08□□□□□ -2.08
CHD9-209ENST00000564255 KANK1Q14678 1352 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 TAPBPO15533 448 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 ECI2O75521 394 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 SFTPCP11686 197 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 CDH5P33151 784 aaPredicted RBP2.07□□□□□ -2.08
CHD9-209ENST00000564255 ETV5P41161 510 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 MAGEA5P43359 124 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 BDKRB1P46663 353 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 P2RY1P47900 373 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 AP3M2P53677 418 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 RND3P61587 244 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 NCBP1Q09161 790 aaKnown RBP2.07□□□□□ -2.08
CHD9-209ENST00000564255 MAPK6Q16659 721 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 TIGITQ495A1 244 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 VWA2Q5GFL6 755 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 REP15Q6BDI9 236 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 ACSM5Q6NUN0 579 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 EMBQ6PCB8 327 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 TAS2R42Q7RTR8 314 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 LRRC49Q8IUZ0 686 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 SLC38A6Q8IZM9 456 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 C4orf32Q8N8J7 132 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 SUMF1Q8NBK3 374 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 CSNK1G2-AS1Q8NCQ2 148 aa2.07□□□□□ -2.08
CHD9-209ENST00000564255 TRPV1Q8NER1 839 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms