RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 MGRN1O60291 552 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 ITGA10O75578 1167 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 GCM2O75603 506 aaPredicted RBP11.81□□□□□ -0.52
CLK3-214ENST00000564096 UTS2O95399 124 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 ZIC2O95409 532 aaPredicted RBP11.81□□□□□ -0.52
CLK3-214ENST00000564096 IGKV1D-16P01601 117 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 FABP3P05413 133 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 CELA2AP08217 269 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 FBXO45P0C2W1 286 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 CD247P20963 164 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 CASRP41180 1078 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 KCNJ5P48544 419 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 CRYBA2P53672 197 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 ZNF141Q15928 474 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 MEP1AQ16819 746 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 BROXQ5VW32 411 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 AP1ARQ63HQ0 302 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 OLIG3Q7RTU3 272 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 CYP4Z1Q86W10 505 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 RPS19BP1Q86WX3 136 aaKnown RBP11.81□□□□□ -0.52
CLK3-214ENST00000564096 GPALPP1Q8IXQ4 340 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 ARMC10Q8N2F6 343 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 TMEM156Q8N614 296 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 BRIX1Q8TDN6 353 aaKnown RBP11.81□□□□□ -0.52
CLK3-214ENST00000564096 SPACA9Q96E40 222 aaPredicted RBP11.81□□□□□ -0.52
CLK3-214ENST00000564096 THOC3Q96J01 351 aaKnown RBP11.81□□□□□ -0.52
CLK3-214ENST00000564096 LMF1Q96S06 567 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 TBL1XR1Q9BZK7 514 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 LHPPQ9H008 270 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.81□□□□□ -0.52
CLK3-214ENST00000564096 ARMC1Q9NVT9 282 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 SLC35A3Q9Y2D2 325 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 SCN2AQ99250 2005 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 ARGFXA6NJG6 315 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 H0Y3Z8 333 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 CDK2AP1O14519 115 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 TSPAN2O60636 221 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 ICOSLGO75144 302 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 UGT2B17O75795 530 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 NADKO95544 446 aaPredicted RBP11.8□□□□□ -0.52
CLK3-214ENST00000564096 FESP07332 822 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 CYP4B1P13584 511 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 UQCRBP14927 111 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 TBXA2RP21731 343 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 IFNA8P32881 189 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 MLF1P58340 268 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 PDZK1Q5T2W1 519 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 ABHD17BQ5VST6 288 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 ZNF836Q6ZNA1 936 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 VTCN1Q7Z7D3 282 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 RANBP3LQ86VV4 465 aaPredicted RBP11.8□□□□□ -0.52
CLK3-214ENST00000564096 MISPQ8IVT2 679 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 FAM86B1Q8N7N1 296 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 TTC9Q92623 222 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 SLC35B4Q969S0 331 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 CHID1Q9BWS9 393 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 RASSF4Q9H2L5 321 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 LIN28AQ9H9Z2 209 aaKnown RBP11.8□□□□□ -0.52
CLK3-214ENST00000564096 RNPEPL1Q9HAU8 725 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 HPF1Q9NWY4 346 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 SH3GLB1Q9Y371 365 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 FAM32AQ9Y421 112 aaKnown RBP11.8□□□□□ -0.52
CLK3-214ENST00000564096 DTNAQ9Y4J8 743 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 AHCTF1Q8WYP5 2266 aa11.8□□□□□ -0.52
CLK3-214ENST00000564096 NPIPA5A0A0B4J1W7 369 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 A0A1W2PQD3 144 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 SERINC4A6NH21 518 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 TMEM200CA6NKL6 621 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 NPIPA7E9PJI5 369 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 NPIPB9F8W1W9 429 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 TLX3O43711 291 aaPredicted RBP11.79□□□□□ -0.52
CLK3-214ENST00000564096 TPST1O60507 370 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 UGT2B11O75310 529 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 DEAF1O75398 565 aaPredicted RBP11.79□□□□□ -0.52
CLK3-214ENST00000564096 ATP6V1G2O95670 118 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 OXSR1O95747 527 aaPredicted RBP11.79□□□□□ -0.52
CLK3-214ENST00000564096 SEMG1P04279 462 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 NPIPA8P0DM63 369 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 UBL4AP11441 157 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 FASP25445 335 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 EVI2BP34910 448 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 MAGEA2P43356 314 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 RGS8P57771 180 aaPredicted RBP11.79□□□□□ -0.52
CLK3-214ENST00000564096 EEF1A1P68104 462 aaKnown RBP11.79□□□□□ -0.52
CLK3-214ENST00000564096 KCNJ10P78508 379 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 Q0VFX4 171 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 FGFBP1Q14512 234 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 GRAMD1BQ3KR37 738 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 ACER2Q5QJU3 275 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 MRPL2Q5T653 305 aaKnown RBP11.79□□□□□ -0.52
CLK3-214ENST00000564096 ERMP1Q7Z2K6 904 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 NUP54Q7Z3B4 507 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 HMGN2P46Q86SG4 172 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 ZAR1Q86SH2 424 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 CARM1Q86X55 608 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 VRK2Q86Y07 508 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 ZDHHC21Q8IVQ6 265 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 ZNF440Q8IYI8 595 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 GALNT16Q8N428 558 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 SIRT6Q8N6T7 355 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms