RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 USP24Q9UPU5 2620 aa4.82□□□□□ -1.64
HERPUD1-207ENST00000563781 BOD1L1Q8NFC6 3051 aa4.82□□□□□ -1.64
HERPUD1-207ENST00000563781 BSNQ9UPA5 3926 aa4.82□□□□□ -1.64
HERPUD1-207ENST00000563781 SCN3AQ9NY46 2000 aa4.82□□□□□ -1.64
HERPUD1-207ENST00000563781 TRBV5-3A0A0A0MS03 114 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 PRSS51A0A1B0GVH4 220 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 A0A1W2PP18 115 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 TMEM8BA6NDV4 472 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 DBX1A6NMT0 343 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 C17orf105B2RV13 164 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 FXYD1O00168 92 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 PLOD2O00469 737 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 CFLARO15519 480 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 PRKNO60260 465 aaPredicted RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 OR10H2O60403 315 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 DCTN3O75935 186 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 HPP00738 406 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 C1QCP02747 245 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 IFNA16P05015 189 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 IL6P05231 212 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 C8BP07358 591 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 CELA3BP08861 270 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 DDX5P17844 614 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 PI3P19957 117 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 MPIP34949 423 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 LIMS1P48059 325 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 PGDP52209 483 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 NR1H2P55055 460 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 POLE2P56282 527 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 SLC37A1P57057 533 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 HBA1P69905 142 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 MRPS35P82673 323 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ROM1Q03395 351 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 FUT7Q11130 342 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 HSPB3Q12988 150 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 BIKQ13323 160 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 EXOSC7Q15024 291 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 CR1LQ2VPA4 569 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 GTDC1Q4AE62 458 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 TRMT12Q53H54 448 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ANXA8L1Q5VT79 327 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 PLAG1Q6DJT9 500 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 TMEM107Q6UX40 140 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 CD300LDQ6UXZ3 194 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 TMEM64Q6YI46 380 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 NDUFAF7Q7L592 441 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ANKRD46Q86W74 232 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 SNX32Q86XE0 403 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 RAB43Q86YS6 212 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 EGFL6Q8IUX8 553 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 MSRB3Q8IXL7 192 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 SAMD14Q8IZD0 417 aaPredicted RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 KIF2BQ8N4N8 673 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 FITM2Q8N6M3 262 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 NATD1Q8N6N6 113 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ZNF615Q8N8J6 731 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 APCDD1LQ8NCL9 501 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 MORN4Q8NDC4 146 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 C7orf57Q8NEG2 295 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 OR7G2Q8NG99 324 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 OR14A16Q8NHC5 309 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 GOT1L1Q8NHS2 421 aaPredicted RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ZFP28Q8NHY6 868 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 SLC2A12Q8TD20 617 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ELP5Q8TE02 316 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ADAMTS15Q8TE58 950 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ZNF721Q8TF20 911 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 HOXB13Q92826 284 aaPredicted RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 DAZLQ92904 295 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 RIT1Q92963 219 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 NCLNQ969V3 563 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ELP4Q96EB1 424 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ZBED6CLQ96FA7 236 aaPredicted RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 SENP5Q96HI0 755 aaPredicted RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 MRGPRX4Q96LA9 322 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 IP6K3Q96PC2 410 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 OR52E6Q96RD3 313 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 PRPF18Q99633 342 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 LPAR4Q99677 370 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 SYT3Q9BQG1 590 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 TUBB6Q9BUF5 446 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 CNPPD1Q9BV87 410 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 NUDT9Q9BW91 350 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 SEMA4CQ9C0C4 833 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 PAIP1Q9H074 479 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 CXorf56Q9H5V9 222 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 EPS8L2Q9H6S3 715 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ANKRA2Q9H9E1 313 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ZNF160Q9HCG1 818 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 SLC6A13Q9NSD5 602 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 GIMAP4Q9NUV9 329 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 MRGBPQ9NV56 204 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ATAD3AQ9NVI7 634 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ARL8BQ9NVJ2 186 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 NTMQ9P121 344 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 ERVK-19Q9WJR5 959 aa4.81□□□□□ -1.64
HERPUD1-207ENST00000563781 PTPRQQ9UMZ3 2332 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 NUP210LQ5VU65 1888 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.8□□□□□ -1.64
HERPUD1-207ENST00000563781 A0A096LPI6 279 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms