RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 SEC24DO94855 1032 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-208ENST00000563220 GASTP01350 101 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 ITGAMP11215 1152 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 ITIH1P19827 911 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 EPHA2P29317 976 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 PPICP45877 212 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 SH3BGRP55822 239 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-208ENST00000563220 RGS8P57771 180 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-208ENST00000563220 INSM1Q01101 510 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-208ENST00000563220 PLAURQ03405 335 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 DCST1Q5T197 706 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 MRPL14Q6P1L8 145 aaKnown RBP16.69■□□□□ 0.26
COMMD4-208ENST00000563220 ANKRD37Q7Z713 158 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 SLC7A13Q8TCU3 470 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 ADIPOR1Q96A54 375 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 SPSB2Q99619 263 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 CMKLR1Q99788 373 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 GRIP2Q9C0E4 1043 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 NXF5Q9H1B4 397 aaKnown RBP16.69■□□□□ 0.26
COMMD4-208ENST00000563220 PARD6AQ9NPB6 346 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 SLC39A1Q9NY26 324 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 COMMD3-BMI1R4GMX3 469 aa16.69■□□□□ 0.26
COMMD4-208ENST00000563220 RALGAPA1Q6GYQ0 2036 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 A0A1W2PRQ8 180 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 CDHR4A6H8M9 788 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 ALOX12BO75342 701 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 CYP4B1P13584 511 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 CBLP22681 906 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 GSTT1P30711 240 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 CLK3P49761 638 aaKnown RBP16.68■□□□□ 0.26
COMMD4-208ENST00000563220 GPR143P51810 404 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 ZNF136P52737 540 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 SMIM11AP58511 58 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 DGCR6Q14129 220 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 EIPR1Q53HC9 387 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 PDZK1Q5T2W1 519 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 FAM199XQ6PEV8 388 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-208ENST00000563220 C9orf40Q8IXQ3 194 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 OR1N1Q8NGS0 311 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 SLC26A1Q9H2B4 701 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 TMCC3Q9ULS5 477 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 CFL2Q9Y281 166 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 NUP210LQ5VU65 1888 aa16.68■□□□□ 0.26
COMMD4-208ENST00000563220 COL27A1Q8IZC6 1860 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-208ENST00000563220 ARRDC5A6NEK1 342 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 CPSF4LA6NMK7 179 aaKnown RBP16.67■□□□□ 0.26
COMMD4-208ENST00000563220 B4E171 279 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 NPIPB9F8W1W9 429 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 CCNYL3P0C7X3 344 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 PRG2P13727 222 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 POU2F1P14859 743 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 ETV5P41161 510 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 TSPAN7P41732 249 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 EMP2P54851 167 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 PODNL1Q6PEZ8 512 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 AQP11Q8NBQ7 271 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 PRSS33Q8NF86 280 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 DIO2Q92813 273 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 ART5Q96L15 291 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 MCHR1Q99705 422 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 G6PC3Q9BUM1 346 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 SH3PXD2BA1X283 911 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 E9PQ18 207 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 FAAHO00519 579 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 CLPTM1O96005 669 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 THY1P04216 161 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 GKN3PP0CG01 181 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 AGXTP21549 392 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 DRD5P21918 477 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 TAS2R41P59536 307 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 LSM11P83369 360 aaKnown RBP eCLIP16.67■□□□□ 0.26
COMMD4-208ENST00000563220 NPRL3Q12980 569 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 APOFQ13790 326 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 EBPQ15125 230 aaKnown RBP16.67■□□□□ 0.26
COMMD4-208ENST00000563220 ZNF141Q15928 474 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.67■□□□□ 0.26
COMMD4-208ENST00000563220 ENTPD8Q5MY95 495 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 MORN4Q8NDC4 146 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 OR4C3Q8NH37 302 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 GTPBP3Q969Y2 492 aaKnown RBP16.67■□□□□ 0.26
COMMD4-208ENST00000563220 LCORQ96JN0 433 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-208ENST00000563220 NRSN2Q9GZP1 204 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 LOXL2Q9Y4K0 774 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 PCDHGA10Q9Y5H3 936 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 B3GALT1Q9Y5Z6 326 aa16.67■□□□□ 0.26
COMMD4-208ENST00000563220 TEX51A0A1B0GUA7 166 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 C2orf92A0A1B0GVN3 265 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 AP3D1O14617 1153 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 UGT2B11O75310 529 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 RFPL3O75679 317 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 CYP7B1O75881 506 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 TFAP2AP05549 437 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 CDH2P19022 906 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-208ENST00000563220 ATP12AP54707 1039 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 E2F1Q01094 437 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 CSRP2Q16527 193 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 FAM69BQ5VUD6 431 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 ZNF614Q8N883 585 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 ADAMTS16Q8TE57 1224 aa16.66■□□□□ 0.26
COMMD4-208ENST00000563220 CNOT9Q92600 299 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms