RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	EFHD2	Q96C19	240 aa	Predicted RBP	7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	NXNL1	Q96CM4	212 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	KLHL29	Q96CT2	875 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	HS6ST2	Q96MM7	605 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	GPR78	Q96P69	363 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	SHARPIN	Q9H0F6	387 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	PTGES2	Q9H7Z7	377 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	L2HGDH	Q9H9P8	463 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	FOLH1B	Q9HBA9	442 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	NGB	Q9NPG2	151 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	SDHAF3	Q9NRP4	125 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	AHSP	Q9NZD4	102 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	FLRT3	Q9NZU0	649 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	PSME2	Q9UL46	239 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	CLEC4A	Q9UMR7	237 aa		7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	TNPO3	Q9Y5L0	923 aa	Known RBP	7.39	□□□□□ -1.23
CKLF-208	ENST00000563092	MGAM2	Q2M2H8	2515 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092		H7C417	338 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	SCO2	O43819	266 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	LMX1B	O60663	402 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	RAMP1	O60894	148 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	SIX3	O95343	332 aa	Predicted RBP	7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	FES	P07332	822 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	TUBB	P07437	444 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	SRD5A1	P18405	259 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	SSTR1	P30872	391 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	EIF1AX	P47813	144 aa	Known RBP	7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	PRR5	P85299	388 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	TRAF3	Q13114	568 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	P2RY6	Q15077	328 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	SGCB	Q16585	318 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	UBAP2	Q5T6F2	1119 aa	Known RBP	7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	FAM180B	Q6P0A1	224 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	APOOL	Q6UXV4	268 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	CCDC91	Q7Z6B0	441 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	TBC1D1	Q86TI0	1168 aa	Predicted RBP	7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	TDRP	Q86YL5	185 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	SLC44A2	Q8IWA5	706 aa	Predicted RBP	7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	ZBED8	Q8IZ13	594 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	OR7G2	Q8NG99	324 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	OR9A2	Q8NGT5	310 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	RNF128	Q8TEB7	428 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	C10orf105	Q8TEF2	133 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	PROX1	Q92786	737 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	NPAS1	Q99742	590 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	POTEKP	Q9BYX7	375 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	PLA2G12A	Q9BZM1	189 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	BRF2	Q9HAW0	419 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	GP6	Q9HCN6	339 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	FAIM	Q9NVQ4	179 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	FBXO34	Q9NWN3	711 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	CISD1	Q9NZ45	108 aa	Known RBP	7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	XPR1	Q9UBH6	696 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	MCTS1	Q9ULC4	181 aa	Known RBP	7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	SNX12	Q9UMY4	172 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	PPP2R2C	Q9Y2T4	447 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	ANGPTL3	Q9Y5C1	460 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092	ZNF780B	Q9Y6R6	833 aa		7.38	□□□□□ -1.23
CKLF-208	ENST00000563092		A0A087WV62	115 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092		A0A087WZY1	265 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092		A0A0J9YW62	118 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	HMX2	A2RU54	273 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	VWC2L	B2RUY7	222 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	ZNF814	B7Z6K7	855 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	SHISA8	B8ZZ34	492 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	EIF1AY	O14602	144 aa	Known RBP	7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	CXCL13	O43927	109 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	DLX3	O60479	287 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	IL33	O95760	270 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	PLG	P00747	810 aa	Predicted RBP	7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	ZNF16	P17020	682 aa	Predicted RBP	7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	SPR	P35270	261 aa	Predicted RBP	7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	KRT20	P35900	424 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	NUDT6	P53370	316 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	RAC1	P63000	192 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	C17orf67	Q0P5P2	114 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	ACAP2	Q15057	778 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	TSC22D1	Q15714	1073 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	FAM120AOS	Q5T036	256 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	GRTP1	Q5TC63	336 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	AGAP6	Q5VW22	663 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	CLEC2A	Q6UVW9	174 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	ESPNL	Q6ZVH7	1005 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	SSX8	Q7RTT4	187 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	MARCH3	Q86UD3	253 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	GAS2L3	Q86XJ1	694 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	WDR75	Q8IWA0	830 aa	Known RBP	7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	SAMD14	Q8IZD0	417 aa	Predicted RBP	7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	ZNF525	Q8N782	197 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	OR2V1	Q8NHB1	315 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	KCTD4	Q8WVF5	259 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	CDKL2	Q92772	493 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	HOXB13	Q92826	284 aa	Predicted RBP	7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	KAT2A	Q92830	837 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	FAIM2	Q9BWQ8	316 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	ALG2	Q9H553	416 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	NOL11	Q9H8H0	719 aa	Known RBP	7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	PRM3	Q9NNZ6	103 aa		7.37	□□□□□ -1.23
CKLF-208	ENST00000563092	TAS2R9	Q9NYW1	312 aa		7.37	□□□□□ -1.23

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