RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 JSRP1Q96MG2 331 aaPredicted RBP7.09□□□□□ -1.27
TCF4-216ENST00000562680 SMAD5Q99717 465 aaKnown RBP7.09□□□□□ -1.27
TCF4-216ENST00000562680 PRRX2Q99811 253 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 SORBS1Q9BX66 1292 aaKnown RBP7.09□□□□□ -1.27
TCF4-216ENST00000562680 S1PR5Q9H228 398 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 CXorf21Q9HAI6 301 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 OLAHQ9NV23 265 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 CKLFQ9UBR5 152 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 POMT2Q9UKY4 750 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 PLPP1O14494 284 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 GAPDHSO14556 408 aaPredicted RBP7.09□□□□□ -1.27
TCF4-216ENST00000562680 DENRO43583 198 aaKnown RBP7.09□□□□□ -1.27
TCF4-216ENST00000562680 NARSO43776 548 aaKnown RBP7.09□□□□□ -1.27
TCF4-216ENST00000562680 TBX19O60806 448 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 ZFAND5O76080 213 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 IFNA7P01567 189 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 FCARP24071 287 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 TAS2R43P59537 309 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 RPS26P62854 115 aaKnown RBP7.09□□□□□ -1.27
TCF4-216ENST00000562680 PLGLB1Q02325 96 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 OR2T33Q8NG76 320 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 UFD1Q92890 307 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 PRRC1Q96M27 445 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 SEC14L4Q9UDX3 406 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 DKKL1Q9UK85 242 aa7.09□□□□□ -1.27
TCF4-216ENST00000562680 EXOSC1Q9Y3B2 195 aaKnown RBP7.09□□□□□ -1.27
TCF4-216ENST00000562680 TRAV20A0A0B4J274 112 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 H0YIG0 161 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 CPNE3O75131 537 aaKnown RBP7.08□□□□□ -1.28
TCF4-216ENST00000562680 CD2P06729 351 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 TMEM11P17152 192 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 COL9A1P20849 921 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 CRISP1P54107 249 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 DCDP81605 110 aaKnown RBP7.08□□□□□ -1.28
TCF4-216ENST00000562680 FAM53BQ14153 422 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 TLR1Q15399 786 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 EXOC3L2Q2M3D2 409 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 SFT2D3Q587I9 215 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 OR51Q1Q8NH59 317 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 NT5CQ8TCD5 201 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 NETO1Q8TDF5 533 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 CCDC120Q96HB5 630 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 LRRC3BQ96PB8 259 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 LMF2Q9BU23 707 aaKnown RBP7.08□□□□□ -1.28
TCF4-216ENST00000562680 HDHD2Q9H0R4 259 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 PRDM9Q9NQV7 894 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 SERGEFQ9UGK8 458 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 A0A1B0GX78 115 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 DAPL1A0PJW8 107 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 NPIPA5E9PKD4 350 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 SCRG1O75711 98 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 DCAF12Q5T6F0 453 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 ARHGAP11AQ6P4F7 1023 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 ZNF773Q6PK81 442 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 OPN5Q6U736 354 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 TMEM92Q6UXU6 159 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 LURAP1LQ8IV03 231 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 MISPQ8IVT2 679 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 TRUB1Q8WWH5 349 aaKnown RBP7.08□□□□□ -1.28
TCF4-216ENST00000562680 SLC46A1Q96NT5 459 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 RBP7Q96R05 134 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 A4GALTQ9NPC4 353 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 C5AR2Q9P296 337 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 NPIPA1Q9UND3 350 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 UNC119BA6NIH7 251 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 DIRAS1O95057 198 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 AHCYP23526 432 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 CDH11P55287 796 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 GABARAPL2P60520 117 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 DLX2Q07687 328 aaPredicted RBP7.08□□□□□ -1.28
TCF4-216ENST00000562680 LPAL2Q16609 132 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 DCST2Q5T1A1 773 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 FBXO27Q8NI29 283 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 C1GALT1C1Q96EU7 318 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 GIMAP5Q96F15 307 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 AMDHD1Q96NU7 426 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 OR1F2PQ96R84 312 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 COMMD4Q9H0A8 199 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 TIGARQ9NQ88 270 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 HCN2Q9UL51 889 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 DAPP1Q9UN19 280 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 PCDH17O14917 1159 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 PIAS2O75928 621 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 PRR35P0CG20 571 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 DCTP40126 519 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 HTR3AP46098 478 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 OR1E2P47887 323 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 GBX2P52951 348 aaPredicted RBP7.08□□□□□ -1.28
TCF4-216ENST00000562680 ACTC1P68032 377 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 ACTA1P68133 377 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 GALEQ14376 348 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 GINS1Q14691 196 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 C6orf132Q5T0Z8 1188 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 TSPYL5Q86VY4 417 aaPredicted RBP7.08□□□□□ -1.28
TCF4-216ENST00000562680 PAQR7Q86WK9 346 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 ATP6V1C2Q8NEY4 427 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 OR4K5Q8NGD3 323 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 ZNF583Q96ND8 569 aa7.08□□□□□ -1.28
TCF4-216ENST00000562680 OR7D2Q96RA2 312 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms