RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 OR5D16Q8NGK9 328 aa8.58□□□□□ -1.04
NSMCE1-203ENST00000562039 OR4C3Q8NH37 302 aa8.58□□□□□ -1.04
NSMCE1-203ENST00000562039 CEP70Q8NHQ1 597 aa8.58□□□□□ -1.04
NSMCE1-203ENST00000562039 INTS12Q96CB8 462 aaKnown RBP8.58□□□□□ -1.04
NSMCE1-203ENST00000562039 METTL2AQ96IZ6 378 aaKnown RBP8.58□□□□□ -1.04
NSMCE1-203ENST00000562039 MS4A4EQ96PG1 132 aa8.58□□□□□ -1.04
NSMCE1-203ENST00000562039 ZNF559Q9BR84 538 aa8.58□□□□□ -1.04
NSMCE1-203ENST00000562039 G6PC3Q9BUM1 346 aa8.58□□□□□ -1.04
NSMCE1-203ENST00000562039 ZNF337Q9Y3M9 751 aa8.58□□□□□ -1.04
NSMCE1-203ENST00000562039 APCP25054 2843 aa8.58□□□□□ -1.04
NSMCE1-203ENST00000562039 MED12LQ86YW9 2145 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 GOLGA8QA0A0J9YX86 632 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 TMEM120BA0PK00 339 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 OR2M5A3KFT3 312 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 GOLGA8OA6NCC3 632 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 GOLGA8NF8WBI6 632 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 DVL2O14641 736 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 OIP5O43482 229 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 SLITRK5O94991 958 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 KCNK2O95069 426 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 ZWINTO95229 277 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 OXSR1O95747 527 aaPredicted RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 TGM6O95932 706 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 C1QCP02747 245 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 HOXD4P09016 255 aaPredicted RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 MYZAPP0CAP1 466 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 DHRS4L1P0CG22 281 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 SSTR2P30874 369 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 CEACAM8P31997 349 aaPredicted RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 SERPINB5P36952 375 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 CCT3P49368 545 aaKnown RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 PRIM2P49643 509 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 CLK3P49761 638 aaKnown RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 LHX2P50458 406 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 PSMD4P55036 377 aaKnown RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 GFRA1P56159 465 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 DSCR4P56555 118 aaPredicted RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 CLDN18P56856 261 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 CLDN20P56880 219 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 WDR4P57081 412 aaKnown RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 MAGOHP61326 146 aaKnown RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 POU6F2P78424 691 aaPredicted RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 SLC25A35Q3KQZ1 300 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 TNFAIP8L3Q5GJ75 292 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 NHSL2Q5HYW2 709 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 CDC73Q6P1J9 531 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 AAGABQ6PD74 315 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 POMZP3Q6PJE2 187 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 LRIG3Q6UXM1 1119 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 P4HA3Q7Z4N8 544 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 HMGN2P46Q86SG4 172 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 GRAMD2AQ8IUY3 354 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 ZNF614Q8N883 585 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 FADS6Q8N9I5 356 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 CDRT4Q8N9R6 151 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 RFWD2Q8NHY2 731 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 LINC01560Q8TB33 94 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 RNF138Q8WVD3 245 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 OR5P2Q8WZ92 322 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 FIG4Q92562 907 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 MTERF3Q96E29 417 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 ZNF845Q96IR2 970 aaPredicted RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 MARK4Q96L34 752 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 DUSP26Q9BV47 211 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 WDR55Q9H6Y2 383 aaPredicted RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 TMEM185BQ9H7F4 350 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 SDHAF3Q9NRP4 125 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 ACSS1Q9NUB1 689 aaPredicted RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 RYDENQ9NUL5 291 aaKnown RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 FAM120CQ9NX05 1096 aaKnown RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 MRTO4Q9UKD2 239 aaKnown RBP8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 RAP2CQ9Y3L5 183 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 L3MBTL1Q9Y468 752 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 LRBAP50851 2863 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 CCDC168Q8NDH2 2452 aa8.57□□□□□ -1.04
NSMCE1-203ENST00000562039 SPG11Q96JI7 2443 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 ADGRG4Q8IZF6 3080 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 MBD3L4A6NDZ8 208 aaPredicted RBP8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 MBD3L3A6NE82 208 aaPredicted RBP8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 MBD3L5A6NJ08 208 aaPredicted RBP8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 CD8B2A6NJW9 211 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 TM9SF1O15321 606 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 BIRC5O15392 142 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 NDUFB5O43674 189 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 SMNDC1O75940 238 aaKnown RBP eCLIP8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 CPN1P15169 458 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 HPGDP15428 266 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 ZNF708P17019 499 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 IGFBP2P18065 325 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 CTSSP25774 331 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 MAP3K8P41279 467 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 RPL14P50914 215 aaKnown RBP8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 CLDN15P56746 228 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 CLDN8P56748 225 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 HBA1P69905 142 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 PRR5P85299 388 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 EMX2Q04743 252 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 POU4F3Q15319 338 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 CD226Q15762 336 aa8.56□□□□□ -1.04
NSMCE1-203ENST00000562039 VPS26BQ4G0F5 336 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms