RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ATP6V1G2O95670 118 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 MLYCDO95822 493 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 WDPCPO95876 746 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 MT-CYBP00156 380 aaPredicted RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 HLA-DQB2P05538 268 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 CELA2AP08217 269 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 FGF4P08620 206 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 KRT16P08779 473 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 SLC35E2BP0CK96 405 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 CBSLP0DN79 551 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 T-ENOLP0DO92 83 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 ZNF30P17039 623 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 IMPDH1P20839 514 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 NMBRP28336 390 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 RORAP35398 523 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 CBSP35520 551 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 PGM1P36871 562 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 CD86P42081 329 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 SUOXP51687 545 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 RPS6KA3P51812 740 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 RAP1GDS1P52306 607 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 NUP107P57740 925 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 RPS13P62277 151 aaKnown RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 POLR2LP62875 67 aaKnown RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 RAD51Q06609 339 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 SLC10A7Q0GE19 358 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 STX5Q13190 355 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 RCN2Q14257 317 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 CAPRIN1Q14444 709 aaKnown RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 HERC3Q15034 1050 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 AP5B1Q2VPB7 878 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 TRMT5Q32P41 509 aaKnown RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 GPR33Q49SQ1 333 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 GXYLT1Q4G148 440 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 ALFQ53S48 1182 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 MTX3Q5HYI7 312 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 SIRPB2Q5JXA9 342 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 C1orf189Q5VU69 101 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 ATG9BQ674R7 924 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 CGB2Q6NT52 195 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 AAGABQ6PD74 315 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 AFTPHQ6ULP2 937 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 EPGNQ6UW88 154 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 CES3Q6UWW8 571 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 ZNF793Q6ZN11 406 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 IL17RELQ6ZVW7 336 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 FAM57BQ71RH2 274 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 PRSS42Q7Z5A4 293 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 NET1Q7Z628 596 aaPredicted RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 C10orf107Q8IVU9 208 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 SLC25A41Q8N5S1 370 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 TEX9Q8N6V9 391 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 TMEM217Q8N7C4 229 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 ARIH2OSQ8N7S6 290 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 PPFIBP2Q8ND30 876 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 OR52N4Q8NGI2 321 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 OR4L1Q8NH43 312 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 SPATA22Q8NHS9 363 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 RFWD2Q8NHY2 731 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 RHEBL1Q8TAI7 183 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 LINC01560Q8TB33 94 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 ARRDC2Q8TBH0 407 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 STAG3L4Q8TBR4 150 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 HEXDCQ8WVB3 486 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 ZFPM2Q8WW38 1151 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 HAS2Q92819 552 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 KAT2AQ92830 837 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 POP5Q969H6 163 aaKnown RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 ISG20Q96AZ6 181 aaKnown RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 ZNF501Q96CX3 271 aaPredicted RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 ZBED6CLQ96FA7 236 aaPredicted RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 RSRC1Q96IZ7 334 aaKnown RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 LRFN5Q96NI6 719 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 OR2M4Q96R27 311 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 TRIB3Q96RU7 358 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 PIP5K1AQ99755 562 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 APOL2Q9BQE5 337 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 REG4Q9BYZ8 158 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 SHARPINQ9H0F6 387 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 TFB2MQ9H5Q4 396 aaKnown RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 COG4Q9H9E3 785 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 EFCAB1Q9HAE3 211 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 UGT1A7Q9HAW7 530 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 UGT1A10Q9HAW8 530 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 UGT1A8Q9HAW9 530 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 KCNK13Q9HB14 408 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 MAGEE1Q9HCI5 957 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 TCF7L2Q9NQB0 619 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 BATF3Q9NR55 127 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 KLHL1Q9NR64 748 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 PHPT1Q9NRX4 125 aaPredicted RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 POT1Q9NUX5 634 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 NLE1Q9NVX2 485 aaPredicted RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 TAS2R13Q9NYV9 303 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 TMEM216Q9P0N5 145 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 BAIAP2L1Q9UHR4 511 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 EMCNQ9ULC0 261 aa2.95□□□□□ -1.94
SPG11-225ENST00000561391 PRPF19Q9UMS4 504 aaKnown RBP2.95□□□□□ -1.94
SPG11-225ENST00000561391 NEU3Q9UQ49 428 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms