RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 MYOD1P15172 320 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ABOP16442 354 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 GM2AP17900 193 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 PMCHP20382 165 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 TBXA2RP21731 343 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 UGT1A4P22310 534 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CA4P22748 312 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CA6P23280 308 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 STOMP27105 288 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 IL12BP29460 328 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 MAT2AP31153 395 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 RPL9P32969 192 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 ARR3P36575 388 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 FEN1P39748 380 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 CRATP43155 626 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CX3CR1P49238 355 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 MRPL19P49406 292 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 CASP4P49662 377 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 COMPP49747 757 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 RASSF2P50749 326 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 DCDC1P59894 354 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SARNPP82979 210 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 EWSR1Q01844 656 aaKnown RBP eCLIP1.83□□□□□ -2.12
RTF1-207ENST00000561076 KLRC3Q07444 240 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 RBBP4Q09028 425 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ZP4Q12836 540 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CDH17Q12864 832 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CALCOCO2Q13137 446 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 STX3Q13277 289 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 FZD5Q13467 585 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 TUBA3CQ13748 450 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ENPP2Q13822 863 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CYLC2Q14093 348 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 GCKRQ14397 625 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ZNF169Q14929 603 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 UBE2V2Q15819 145 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CDKN3Q16667 212 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ZSWIM7Q19AV6 140 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ZNF528Q3MIS6 628 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SPATS1Q496A3 300 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SFT2D3Q587I9 215 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 PAN3Q58A45 887 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 XKR4Q5GH76 650 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SLC25A53Q5H9E4 307 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 OTUD3Q5T2D3 398 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 PDSS1Q5T2R2 415 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ARTNQ5T4W7 220 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 DCAF12Q5T6F0 453 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ATP1A1-AS1Q5TC04 95 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 FNDC7Q5VTL7 733 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 GPR107Q5VW38 600 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 PLPP4Q5VZY2 271 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 OR52W1Q6IF63 320 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ACSM5Q6NUN0 579 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ZNF562Q6V9R5 426 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 RAD9BQ6WBX8 426 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 Q6ZSN1 163 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 NDUFAF7Q7L592 441 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SLC16A14Q7RTX9 510 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 TIPARPQ7Z3E1 657 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 CTU1Q7Z7A3 348 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 SCD5Q86SK9 330 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CYP4Z1Q86W10 505 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CATSPERDQ86XM0 798 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 KMT5CQ86Y97 462 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CDKL3Q8IVW4 592 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 MFSD6LQ8IWD5 586 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 NELFCDQ8IXH7 590 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 GPR65Q8IYL9 337 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 RNF10Q8N5U6 811 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 TEX26Q8N6G2 289 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 PQLC3Q8N755 202 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 MAB21L3Q8N8X9 362 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SNX31Q8N9S9 440 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 TTC29Q8NA56 475 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 RELL2Q8NC24 303 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 OR4D10Q8NGI6 311 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 OR51L1Q8NGJ5 315 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 OR4A15Q8NGL6 344 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 OR9G4Q8NGQ1 327 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 OR1L6Q8NGR2 347 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 MARCH1Q8TCQ1 289 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 GPR151Q8TDV0 419 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 AENQ8WTP8 325 aaKnown RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 IL1F10Q8WWZ1 152 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 SUSD6Q92537 303 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 TANKQ92844 425 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ASB9Q96DX5 294 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 TM4SF19Q96DZ7 209 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 CCDC126Q96EE4 140 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 PELI1Q96FA3 418 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ZNF479Q96JC4 524 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 RNF170Q96K19 258 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 LMLNQ96KR4 655 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 C4orf45Q96LM5 186 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ZNF641Q96N77 438 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 FOXN4Q96NZ1 517 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ZNF317Q96PQ6 595 aaPredicted RBP1.83□□□□□ -2.12
RTF1-207ENST00000561076 NEDD4LQ96PU5 975 aa1.83□□□□□ -2.12
RTF1-207ENST00000561076 ALS2CR12Q96Q35 445 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms