RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ZNF225Q9UK10 706 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 PSME2Q9UL46 239 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 MAPRE3Q9UPY8 281 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 CAMK2AQ9UQM7 478 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 TMED5Q9Y3A6 229 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 PCDHA9Q9Y5H5 950 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 GPR45Q9Y5Y3 372 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 PTGDR2Q9Y5Y4 395 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 AKAP6Q13023 2319 aa12.38□□□□□ -0.43
SMAD3-214ENST00000560402 ZNF469Q96JG9 3925 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-214ENST00000560402 CCDC154A6NI56 674 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 SNPHO15079 494 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 ENTPD5O75356 428 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 RSL1D1O76021 490 aaKnown RBP12.37□□□□□ -0.43
SMAD3-214ENST00000560402 IL18BPO95998 194 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 ACTL6AO96019 429 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 NPPAP01160 153 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 ABCB1P08183 1280 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-214ENST00000560402 HSD3B1P14060 373 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 DNASE1P24855 282 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 HSD3B2P26439 372 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 PTPN6P29350 595 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 ZNF136P52737 540 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 TRA2BP62995 288 aaKnown RBP12.37□□□□□ -0.43
SMAD3-214ENST00000560402 PSPHP78330 225 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 PLCXD2Q0VAA5 305 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 MAP4K2Q12851 820 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 CSTF3Q12996 717 aaKnown RBP12.37□□□□□ -0.43
SMAD3-214ENST00000560402 RCN1Q15293 331 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 TOMM20Q15388 145 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 PRICKLE4Q2TBC4 344 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 TIGD3Q6B0B8 471 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 PGM2L1Q6PCE3 622 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 TMEM64Q6YI46 380 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 NUP54Q7Z3B4 507 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 PRR22Q8IZ63 422 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 GLB1L3Q8NCI6 653 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-214ENST00000560402 OR1J4Q8NGS1 313 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 GOT1L1Q8NHS2 421 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-214ENST00000560402 NRGNQ92686 78 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 CCDC124Q96CT7 223 aaKnown RBP12.37□□□□□ -0.43
SMAD3-214ENST00000560402 SPDL1Q96EA4 605 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 METTL2AQ96IZ6 378 aaKnown RBP12.37□□□□□ -0.43
SMAD3-214ENST00000560402 ZFP3Q96NJ6 502 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 ALPK1Q96QP1 1244 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 CDRT15Q96T59 188 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 TMUB1Q9BVT8 246 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 ITPAQ9BY32 194 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 UGT2B28Q9BY64 529 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 CALHM2Q9HA72 323 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 LRTM1Q9HBL6 345 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 C1orf109Q9NX04 203 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 MAT2BQ9NZL9 334 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 PRODH2Q9UF12 536 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 KIAA1549Q9HCM3 1950 aa12.37□□□□□ -0.43
SMAD3-214ENST00000560402 A0A1B0GTL3 188 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 A0A1W2PP18 115 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 SERTM1A2A2V5 107 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 LSM1O15116 133 aaKnown RBP12.36□□□□□ -0.43
SMAD3-214ENST00000560402 ABCB7O75027 752 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 PDE5AO76074 875 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 PRPS2P11908 318 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 CD99P14209 185 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 BMP7P18075 431 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 CSNK2A2P19784 350 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-214ENST00000560402 S1PR1P21453 382 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 TACR1P25103 407 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 CTSSP25774 331 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 OPRM1P35372 400 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 POLR2JP52435 117 aaKnown RBP12.36□□□□□ -0.43
SMAD3-214ENST00000560402 CLNS1AP54105 237 aaKnown RBP12.36□□□□□ -0.43
SMAD3-214ENST00000560402 RPL38P63173 70 aaKnown RBP12.36□□□□□ -0.43
SMAD3-214ENST00000560402 FLOT2Q14254 428 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 DAZAP2Q15038 168 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-214ENST00000560402 SGO1Q5FBB7 561 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 ZFP1Q6P2D0 407 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 POMZP3Q6PJE2 187 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 BLOC1S3Q6QNY0 202 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 CAMKMTQ7Z624 323 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 TGIF2LYQ8IUE0 185 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 FAM83FQ8NEG4 500 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-214ENST00000560402 ZPLD1Q8TCW7 415 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 HGDQ93099 445 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 UCN3Q969E3 161 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 ABTB1Q969K4 478 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-214ENST00000560402 CTHRC1Q96CG8 243 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 MBD6Q96DN6 1003 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 OMA1Q96E52 524 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 WDYHV1Q96HA8 205 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 LCORQ96JN0 433 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-214ENST00000560402 CLPTM1LQ96KA5 538 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 GNRHR2Q96P88 292 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 TRIB1Q96RU8 372 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 CCM2LQ9NUG4 571 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-214ENST00000560402 STX18Q9P2W9 335 aaKnown RBP12.36□□□□□ -0.43
SMAD3-214ENST00000560402 ZNF639Q9UID6 485 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 CES1P1Q9UKY3 287 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 CBLCQ9ULV8 474 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 POMPQ9Y244 141 aa12.36□□□□□ -0.43
SMAD3-214ENST00000560402 SLC6A5Q9Y345 797 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms