RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ADAP2Q9NPF8 381 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 CALML5Q9NZT1 146 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 KCMF1Q9P0J7 381 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 COMMD3Q9UBI1 195 aa9.37□□□□□ -0.91
LRRC28-216ENST00000559819 TRANK1O15050 2925 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 SYNDIG1LA6NDD5 238 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 FABP12A6NFH5 140 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 CD8B2A6NJW9 211 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 LDB3O75112 727 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 CD8BP10966 210 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 PVRP15151 417 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 POLR2CP19387 275 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-216ENST00000559819 TSFMP43897 325 aaKnown RBP9.36□□□□□ -0.91
LRRC28-216ENST00000559819 HTR3AP46098 478 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 RPS15AP62244 130 aaKnown RBP9.36□□□□□ -0.91
LRRC28-216ENST00000559819 SYCE2Q6PIF2 218 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 WDR88Q6ZMY6 472 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF517Q6ZMY9 492 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-216ENST00000559819 MBOAT2Q6ZWT7 520 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 SFTPA2Q8IWL1 248 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 SIRT6Q8N6T7 355 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 CLDN22Q8N7P3 220 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 TMEM52Q8NDY8 209 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 OR4K14Q8NGD5 310 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 PATE1Q8WXA2 126 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 SLC35B4Q969S0 331 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 NACC2Q96BF6 587 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 SCARF2Q96GP6 870 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-216ENST00000559819 ART5Q96L15 291 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF649Q9BS31 505 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 DPH1Q9BZG8 443 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 ENKD1Q9H0I2 346 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 HINT3Q9NQE9 182 aaKnown RBP9.36□□□□□ -0.91
LRRC28-216ENST00000559819 WBP1LQ9NX94 342 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 OR6C2Q9NZP2 312 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 CBLCQ9ULV8 474 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 PCDHGB2Q9Y5G2 931 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 DOCK8Q8NF50 2099 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-216ENST00000559819 C2orf92A0A1B0GVN3 265 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 A0A1W2PQF6 199 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 GSAPA4D1B5 854 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 LRRC72A6NJI9 287 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 PEX12O00623 359 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 CASKO14936 926 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 TMCC2O75069 709 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 RASGRP1O95267 797 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 CSF2P04141 144 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 EIF2S1P05198 315 aaKnown RBP9.36□□□□□ -0.91
LRRC28-216ENST00000559819 ZGLP1P0C6A0 271 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 HTR2AP28223 471 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 GABRA5P31644 462 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF136P52737 540 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 IFITM2Q01629 132 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 PYDC2Q56P42 97 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 SLC35F1Q5T1Q4 408 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 ATAD3CQ5T2N8 411 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 FCRL6Q6DN72 434 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 NUDT18Q6ZVK8 323 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 MARCH9Q86YJ5 346 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 GATAD2AQ86YP4 633 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 KLBQ86Z14 1044 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 CPOQ8IVL8 374 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 SCAIQ8N9R8 606 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 FAM181AQ8N9Y4 354 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 OR5T3Q8NGG3 340 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 OSTF1Q92882 214 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 DMRTB1Q96MA1 342 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 SECISBP2Q96T21 854 aaKnown RBP9.36□□□□□ -0.91
LRRC28-216ENST00000559819 TBX5Q99593 518 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 C1QTNF7Q9BXJ2 289 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 C11orf54Q9H0W9 315 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-216ENST00000559819 ISG20L2Q9H9L3 353 aaKnown RBP9.36□□□□□ -0.91
LRRC28-216ENST00000559819 NEK6Q9HC98 313 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 ATP13A2Q9NQ11 1180 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 IL20Q9NYY1 176 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 HEBP2Q9Y5Z4 205 aa9.36□□□□□ -0.91
LRRC28-216ENST00000559819 SCN2AQ99250 2005 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 SZT2Q5T011 3432 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 SNTNA6NMZ2 147 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 HRO43593 1189 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 HPGDSO60760 199 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 KCNJ13O60928 360 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 OR5F1O95221 314 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 SLC35G6P0C7Q6 338 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 HOXB2P14652 356 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 UGT2B7P16662 529 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 CELP19835 753 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 MAKP20794 623 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 APEX1P27695 318 aaKnown RBP9.35□□□□□ -0.91
LRRC28-216ENST00000559819 NTSR1P30989 418 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 IFNA8P32881 189 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 GCGRP47871 477 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 EEF1A1P68104 462 aaKnown RBP9.35□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF362Q5T0B9 420 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-216ENST00000559819 SMARCD3Q6STE5 483 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 OR51G2Q8NGK0 314 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 SETD6Q8TBK2 473 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 NT5CQ8TCD5 201 aa9.35□□□□□ -0.91
LRRC28-216ENST00000559819 CHAC2Q8WUX2 184 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms