RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 OR5M1Q8NGP8 315 aa13.64□□□□□ -0.23
SMAD6-203ENST00000558937 CAVIN3Q969G5 261 aa13.64□□□□□ -0.23
SMAD6-203ENST00000558937 PPP3R2Q96LZ3 170 aa13.64□□□□□ -0.23
SMAD6-203ENST00000558937 LIME1Q9H400 295 aa13.64□□□□□ -0.23
SMAD6-203ENST00000558937 SIRT3Q9NTG7 399 aaPredicted RBP13.64□□□□□ -0.23
SMAD6-203ENST00000558937 GALNT8Q9NY28 637 aa13.64□□□□□ -0.23
SMAD6-203ENST00000558937 ATP6V1HQ9UI12 483 aa13.64□□□□□ -0.23
SMAD6-203ENST00000558937 PACSIN3Q9UKS6 424 aa13.64□□□□□ -0.23
SMAD6-203ENST00000558937 IGLV3-32A0A0A0MS00 114 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 SLC22A20A6NK97 555 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 TMEM114B3SHH9 223 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 H0YC42 278 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 H3BML4 177 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 SEC14L5O43304 696 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 GMFGO60234 142 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 PEX11AO75192 247 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 SKAP2O75563 359 aaPredicted RBP13.63□□□□□ -0.23
SMAD6-203ENST00000558937 TNFSF13O75888 250 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 EPXP11678 715 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 CD1EP15812 388 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 MAPK1P28482 360 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 SERPINB5P36952 375 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 SUCLG1P53597 346 aaKnown RBP13.63□□□□□ -0.23
SMAD6-203ENST00000558937 TPD52P55327 224 aaPredicted RBP13.63□□□□□ -0.23
SMAD6-203ENST00000558937 CLDN15P56746 228 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 C17orf67Q0P5P2 114 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 DUSP5Q16690 384 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 EXOSC6Q5RKV6 272 aaKnown RBP13.63□□□□□ -0.23
SMAD6-203ENST00000558937 LRIG3Q6UXM1 1119 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 CHMP1BQ7LBR1 199 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 R3HCC1LQ7Z5L2 792 aaKnown RBP13.63□□□□□ -0.23
SMAD6-203ENST00000558937 ZAR1Q86SH2 424 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 SLC16A11Q8NCK7 471 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 OR7A2PQ8NGA2 310 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 GOT1L1Q8NHS2 421 aaPredicted RBP13.63□□□□□ -0.23
SMAD6-203ENST00000558937 FIG4Q92562 907 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 FAM120BQ96EK7 910 aaKnown RBP13.63□□□□□ -0.23
SMAD6-203ENST00000558937 OTUB1Q96FW1 271 aaPredicted RBP13.63□□□□□ -0.23
SMAD6-203ENST00000558937 C16orf58Q96GQ5 468 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 C3orf30Q96M34 536 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 C1orf50Q9BV19 199 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 PIGMQ9H3S5 423 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMAD6-203ENST00000558937 ZNF337Q9Y3M9 751 aa13.63□□□□□ -0.23
SMAD6-203ENST00000558937 V9GYY5 206 aaPredicted RBP13.63□□□□□ -0.23
SMAD6-203ENST00000558937 HIVEP1P15822 2718 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 SHISA8B8ZZ34 492 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 ALG1L2C9J202 215 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 LINC01387J3KSC0 135 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 TYROBPO43914 113 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 SLU7O95391 586 aaKnown RBP13.62□□□□□ -0.23
SMAD6-203ENST00000558937 OXSR1O95747 527 aaPredicted RBP13.62□□□□□ -0.23
SMAD6-203ENST00000558937 BPGMP07738 259 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 NGFRP08138 427 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 ALOX5P09917 674 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 DDX5P17844 614 aaKnown RBP13.62□□□□□ -0.23
SMAD6-203ENST00000558937 RPL3P39023 403 aaKnown RBP13.62□□□□□ -0.23
SMAD6-203ENST00000558937 DIO3P55073 304 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 CLDN20P56880 219 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 EEF1A1P68104 462 aaKnown RBP13.62□□□□□ -0.23
SMAD6-203ENST00000558937 PTGR1Q14914 329 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 MLC1Q15049 377 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMAD6-203ENST00000558937 GLYR1Q49A26 553 aaPredicted RBP13.62□□□□□ -0.23
SMAD6-203ENST00000558937 ATP6AP1LQ52LC2 224 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 EEF1A1P5Q5VTE0 462 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 WDR93Q6P2C0 686 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 VWA1Q6PCB0 445 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 FIGNL1Q6PIW4 674 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 COX18Q8N8Q8 333 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 GATSQ8NAP1 163 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 OR6Y1Q8NGX8 325 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 FAM110BQ8TC76 370 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 SMPDL3BQ92485 455 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 NINJ1Q92982 152 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 PIGQQ9BRB3 760 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 YIPF4Q9BSR8 244 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 TMEM109Q9BVC6 243 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 PINK1Q9BXM7 581 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 ZCCHC3Q9NUD5 404 aaKnown RBP13.62□□□□□ -0.23
SMAD6-203ENST00000558937 FBXO34Q9NWN3 711 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 ZDHHC2Q9UIJ5 367 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 ST6GALNAC2Q9UJ37 374 aa13.62□□□□□ -0.23
SMAD6-203ENST00000558937 ABCA4P78363 2273 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 NDUFB5O43674 189 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 KCNK2O95069 426 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 CRHP06850 196 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 LAMP1P11279 417 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 CPOXP36551 454 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 ETV4P43268 484 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 PRIM2P49643 509 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 EEFSECP57772 596 aaKnown RBP13.61□□□□□ -0.23
SMAD6-203ENST00000558937 TMEM44Q2T9K0 475 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 C6orf136Q5SQH8 315 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 CCNJQ5T5M9 372 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 OR2A2Q6IF42 318 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 ZCCHC12Q6PEW1 402 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 OR4C3Q8NH37 302 aa13.61□□□□□ -0.23
SMAD6-203ENST00000558937 JADE3Q92613 823 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms