RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 PRAMEF13Q5VWM6 474 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 LIPJQ5W064 366 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 C5orf46Q6UWT4 87 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 TMPRSS7Q7RTY8 843 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 TEX26Q8N6G2 289 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 KCNJ9Q92806 393 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 SAMD10Q9BYL1 202 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 DUSP22Q9NRW4 184 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 LYRM2Q9NU23 88 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 KLHL9Q9P2J3 617 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 CD84Q9UIB8 345 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 MED12Q93074 2177 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 CYB5AP00167 134 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 CRYBB1P53674 252 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 DAOAP59103 153 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 CNKSR3Q6P9H4 555 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 DLEU7Q6UYE1 221 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 HIST2H3AQ71DI3 136 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 OR5AK2Q8NH90 309 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ADAMTS19Q8TE59 1207 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 FATE1Q969F0 183 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 FBXW5Q969U6 566 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 SCMH1Q96GD3 660 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 AMBRA1Q9C0C7 1298 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 UTS2RQ9UKP6 389 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 SDK2Q58EX2 2172 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 GFRA2O00451 464 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 RDH16O75452 317 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 CKMP06732 381 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 AKAIN1P0CW23 69 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 CLDN6P56747 220 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 COTL1Q14019 142 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 TMEM81Q6P7N7 255 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 BTLAQ7Z6A9 289 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 PROKR1Q8TCW9 393 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 BET1LQ9NYM9 111 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 BIVM-ERCC5R4GMW8 1640 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 CRISP3P54108 245 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF695Q8IW36 515 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 TLR9Q9NR96 1032 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ANKARQ7Z5J8 1434 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 HEG1Q9ULI3 1381 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 A0A0A6YYH2 397 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 A6NJ64 397 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 THBS1P07996 1170 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 SSR2P43308 183 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 SUMO1P63165 101 aaKnown RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 LGALSLQ3ZCW2 172 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF789Q5FWF6 425 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 LCN8Q6JVE9 175 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ETFBKMTQ8IXQ9 262 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 GPR174Q9BXC1 333 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 FCF1Q9Y324 198 aaKnown RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 CFAP20Q9Y6A4 193 aaKnown RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 MBTPS2O43462 519 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 SCG5P05408 212 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 GABRB1P18505 474 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ATP5A1P25705 553 aaKnown RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ACOT7LQ6ZUV0 252 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 TMEM173Q86WV6 379 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 SMAP2Q8WU79 429 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 BCO1Q9HAY6 547 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 FZD3Q9NPG1 666 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 A0A087X0M5 115 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 A0A1B0GX30 115 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 TPT1P13693 172 aaKnown RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 GNSP15586 552 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 TACR2P21452 398 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 FPR3P25089 353 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 FRKP42685 505 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 IFITM2Q01629 132 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ACSM1Q08AH1 577 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 MOGAT2Q3SYC2 334 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ADGRF3Q8IZF5 1079 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 TMEM68Q96MH6 324 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 WRAP53Q9BUR4 548 aaKnown RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 GAREM1Q9H706 876 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF593O00488 134 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 HOXC8P31273 242 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ARHGAP1Q07960 439 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 LRIF1Q5T3J3 769 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 CLDN22Q8N7P3 220 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 KCTD13Q8WZ19 329 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 C16orf58Q96GQ5 468 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 AKR1E2Q96JD6 320 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 CABLES2Q9BTV7 478 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 IL26Q9NPH9 171 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 GAR1Q9NY12 217 aaKnown RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 WRAP73Q9P2S5 460 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF281Q9Y2X9 895 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ARL2-SNX15V9GYD0 113 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF878C9JN71 531 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 PTHP01270 115 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 CX3CR1P49238 355 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF528Q3MIS6 628 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 NPAS3Q8IXF0 933 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF382Q96SR6 550 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 MS4A7Q9GZW8 240 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-248ENST00000558190 NCDNQ9UBB6 729 aa3.49□□□□□ -1.85
ATXN3-248ENST00000558190 NPFFR2Q9Y5X5 522 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms