RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 GMFGO60234 142 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 LCMT2O60294 686 aaKnown RBP2.36□□□□□ -2.03
SPG11-206ENST00000558093 AKR7A3O95154 331 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 ALPPP05187 535 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 GSTA1P08263 222 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 P0C879 139 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 ALPPL2P10696 532 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 CD1EP15812 388 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 ZNF3P17036 446 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 GALP22466 123 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 TRIM23P36406 574 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 METAP1P53582 386 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 PLTPP55058 493 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 VCPP55072 806 aaKnown RBP2.36□□□□□ -2.03
SPG11-206ENST00000558093 NME5P56597 212 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 STX17P56962 302 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 CARD18P57730 90 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 SPAG1Q07617 926 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 GK2Q14410 553 aaPredicted RBP2.36□□□□□ -2.03
SPG11-206ENST00000558093 DPYSL2Q16555 572 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 LRIT3Q3SXY7 679 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 GPAT3Q53EU6 434 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 CWC27Q6UX04 472 aaKnown RBP2.36□□□□□ -2.03
SPG11-206ENST00000558093 B3GLCTQ6Y288 498 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 ADAMTSL5Q6ZMM2 481 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 ARMCX2Q7L311 632 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 PRSS48Q7RTY5 328 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 TTC5Q8N0Z6 440 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 PYROXD2Q8N2H3 581 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 MRPL43Q8N983 215 aaKnown RBP2.36□□□□□ -2.03
SPG11-206ENST00000558093 FAM184AQ8NB25 1140 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 LPCAT1Q8NF37 534 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 ST7LQ8TDW4 575 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 ANKRD7Q92527 254 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 SLCO4A1Q96BD0 722 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 C9orf85Q96MD7 179 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 RUFY1Q96T51 708 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 NAP1L3Q99457 506 aaPredicted RBP2.36□□□□□ -2.03
SPG11-206ENST00000558093 GAL3ST1Q99999 423 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 NFKBIZQ9BYH8 718 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 OSBPL8Q9BZF1 889 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 NSRP1Q9H0G5 558 aaKnown RBP2.36□□□□□ -2.03
SPG11-206ENST00000558093 TSPYL1Q9H0U9 437 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 SYNDIG1Q9H7V2 258 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 COQ10BQ9H8M1 238 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 IL1RAPL2Q9NP60 686 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 NRN1Q9NPD7 142 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 MAD2L2Q9UI95 211 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 APPL1Q9UKG1 709 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 CCPG1Q9ULG6 757 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 RNF115Q9Y4L5 304 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 KLF2Q9Y5W3 355 aaPredicted RBP2.36□□□□□ -2.03
SPG11-206ENST00000558093 MAP3K19Q56UN5 1328 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 TNIKQ9UKE5 1360 aa2.36□□□□□ -2.03
SPG11-206ENST00000558093 NPIPA5A0A0B4J1W7 369 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 XKRY2A2RUG3 117 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 ZSCAN5BA6NJL1 495 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 ZFP92A6NM28 416 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 NPIPA5E9PKD4 350 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 C11orf98E9PRG8 122 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 RTL8CO15255 209 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 NVLO15381 856 aaKnown RBP2.35□□□□□ -2.03
SPG11-206ENST00000558093 BUB1O43683 1085 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 RANBP6O60518 1105 aaKnown RBP2.35□□□□□ -2.03
SPG11-206ENST00000558093 ACTL6AO96019 429 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 OAS1P00973 400 aaKnown RBP2.35□□□□□ -2.03
SPG11-206ENST00000558093 FGF4P08620 206 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 WNT2P09544 360 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 CT45A10P0DMU9 189 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 HPGDP15428 266 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 ELK1P19419 428 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 PTPN4P29074 926 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 IL2RGP31785 369 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 SAA4P35542 130 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 LONP1P36776 959 aaKnown RBP2.35□□□□□ -2.03
SPG11-206ENST00000558093 CASP3P42574 277 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 CCNHP51946 323 aaPredicted RBP2.35□□□□□ -2.03
SPG11-206ENST00000558093 PRRX1P54821 245 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 ZNF33BQ06732 778 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 RCN1Q15293 331 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 PAGE2BQ5JRK9 111 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 NKAIN2Q5VXU1 208 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 SLC22A10Q63ZE4 541 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 TTC19Q6DKK2 380 aaPredicted RBP2.35□□□□□ -2.03
SPG11-206ENST00000558093 ETFRF1Q6IPR1 90 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 ZNF544Q6NX49 715 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 PRSS42Q7Z5A4 293 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 TSEN54Q7Z6J9 526 aaKnown RBP2.35□□□□□ -2.03
SPG11-206ENST00000558093 TAF8Q7Z7C8 310 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 PSTKQ8IV42 348 aaKnown RBP2.35□□□□□ -2.03
SPG11-206ENST00000558093 MCOLN2Q8IZK6 566 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 CADM2Q8N3J6 435 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 FAM133AQ8N9E0 248 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 OR52M1Q8NGK5 317 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 OR13F1Q8NGS4 319 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 OR8K3Q8NH51 312 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 OR52J3Q8NH60 311 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 PSMA8Q8TAA3 256 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 CCDC26Q8TAB7 109 aa2.35□□□□□ -2.03
SPG11-206ENST00000558093 ZNF564Q8TBZ8 553 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms