RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 FOLH1BQ9HBA9 442 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 BATF3Q9NR55 127 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 DUSP22Q9NRW4 184 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 FGF21Q9NSA1 209 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 PNPLA3Q9NST1 481 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 SIDT1Q9NXL6 827 aaKnown RBP6.84□□□□□ -1.31
SPG11-204ENST00000557866 CALML5Q9NZT1 146 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 NDOR1Q9UHB4 597 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 GPN3Q9UHW5 284 aaPredicted RBP6.84□□□□□ -1.31
SPG11-204ENST00000557866 SCOCQ9UIL1 159 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 KCNE5Q9UJ90 142 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 SERTAD3Q9UJW9 196 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 MKLN1Q9UL63 735 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 A4GNTQ9UNA3 340 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 MRPS33Q9Y291 106 aaKnown RBP6.84□□□□□ -1.31
SPG11-204ENST00000557866 DTX4Q9Y2E6 619 aa6.84□□□□□ -1.31
SPG11-204ENST00000557866 TNRC6BQ9UPQ9 1833 aaKnown RBP6.84□□□□□ -1.31
SPG11-204ENST00000557866 CEP192Q8TEP8 1941 aa6.84□□□□□ -1.32
SPG11-204ENST00000557866 VPS13AQ96RL7 3174 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 NPIPA5A0A0B4J1W7 369 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 TRBV4-1A0A0J9YWV2 114 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 LOC100130705A0A1B0GUX0 176 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 A0A1B0GX78 115 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 NPIPA7E9PJI5 369 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 SYT5O00445 386 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 NTN3O00634 580 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 COQ9O75208 318 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 BCAS1O75363 584 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 KCNK2O95069 426 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 GADD45GO95257 159 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 TNFAIP8O95379 198 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 AGR2O95994 175 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 IGKV1D-16P01601 117 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 TFAP2AP05549 437 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 SYPP08247 313 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 NPIPA8P0DM63 369 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 FBLP22087 321 aaKnown RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 CBLP22681 906 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ELAVL4P26378 380 aaKnown RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 PRKAR1BP31321 381 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 GALNSP34059 522 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 MPLP40238 635 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ARHGDIAP52565 204 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 CDH15P55291 814 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 FOXL2P58012 376 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ISL1P61371 349 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 EEF1A1P68104 462 aaKnown RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 PSG6Q00889 435 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 RHAGQ02094 409 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ACY1Q03154 408 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ZNF155Q12901 538 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 FOXD4Q12950 439 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 PIN1Q13526 163 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 SERTAD2Q14140 314 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ZNF267Q14586 743 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 CTU2Q2VPK5 515 aaKnown RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 RFX4Q33E94 735 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 VWA2Q5GFL6 755 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ZNF311Q5JNZ3 666 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 DCST2Q5T1A1 773 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ZNF691Q5VV52 312 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 YOD1Q5VVQ6 348 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 TTC23Q5W5X9 447 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 AP1ARQ63HQ0 302 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 KRT80Q6KB66 452 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 DEF8Q6ZN54 512 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ZNF836Q6ZNA1 936 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 DBX2Q6ZNG2 339 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 QSOX2Q6ZRP7 698 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 THAP5Q7Z6K1 395 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 B3GNT8Q7Z7M8 397 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 LSRQ86X29 649 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 CCDC71Q8IV32 467 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 SLITRK4Q8IW52 837 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 GPR135Q8IZ08 494 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ZNF321PQ8N8H1 164 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ATG16L2Q8NAA4 619 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 SLC38A9Q8NBW4 561 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 OR4N2Q8NGD1 307 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 PTPMT1Q8WUK0 201 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 RASSF5Q8WWW0 418 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 RBM18Q96H35 190 aaKnown RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 FANCD2OSQ96PS1 177 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 OR1F2PQ96R84 312 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 NIPSNAP1Q9BPW8 284 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 PSD2Q9BQI7 771 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 NDC1Q9BTX1 674 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 SPATA5L1Q9BVQ7 753 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 RIBC2Q9H4K1 309 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 MTHFD2LQ9H903 347 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 ZNF304Q9HCX3 659 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 MAN2C1Q9NTJ4 1040 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 C3orf18Q9UK00 162 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 CDC14AQ9UNH5 594 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 SATB2Q9UPW6 733 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ERVK-19Q9WJR5 959 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 ZNF443Q9Y2A4 671 aaPredicted RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 NTNG1Q9Y2I2 539 aa6.83□□□□□ -1.32
SPG11-204ENST00000557866 FAM32AQ9Y421 112 aaKnown RBP6.83□□□□□ -1.32
SPG11-204ENST00000557866 WDR45Q9Y484 360 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms