RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CNOT11Q9UKZ1 510 aaKnown RBP15.17■□□□□ 0.02
NEK9-211ENST00000557673 TRIM33Q9UPN9 1127 aa15.17■□□□□ 0.02
NEK9-211ENST00000557673 NCKAP5O14513 1909 aa15.17■□□□□ 0.02
NEK9-211ENST00000557673 LRRC3CA6NJW4 275 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 PGRP06401 933 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 ENDOUP21128 410 aaKnown RBP15.16■□□□□ 0.02
NEK9-211ENST00000557673 BMP5P22003 454 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 S100A3P33764 101 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 ARFIP2P53365 341 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 SEC24CP53992 1094 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 FBXW4P57775 412 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 HBA1P69905 142 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 RCAN2Q14206 197 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 DAZAP2Q15038 168 aaPredicted RBP15.16■□□□□ 0.02
NEK9-211ENST00000557673 FBXL19-AS1Q494R0 122 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 ANXA8L1Q5VT79 327 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 KIF18BQ86Y91 864 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 FAM120BQ96EK7 910 aaKnown RBP15.16■□□□□ 0.02
NEK9-211ENST00000557673 MS4A4EQ96PG1 132 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 BTBD9Q96Q07 612 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 NXF5Q9H1B4 397 aaKnown RBP15.16■□□□□ 0.02
NEK9-211ENST00000557673 CXorf36Q9H7Y0 433 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 FOLH1BQ9HBA9 442 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 DLL4Q9NR61 685 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 TAS2R9Q9NYW1 312 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 NPFFR2Q9Y5X5 522 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 NINQ8N4C6 2090 aa15.16■□□□□ 0.02
NEK9-211ENST00000557673 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 FAM234BA2RU67 622 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 NME6O75414 186 aaPredicted RBP15.15■□□□□ 0.02
NEK9-211ENST00000557673 EPPINO95925 133 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 IL2RAP01589 272 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 RAF1P04049 648 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 RFPL3SP0C7P2 107 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 TIMP3P35625 211 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 ADAM8P78325 824 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 SF3A3Q12874 501 aaKnown RBP eCLIP15.15■□□□□ 0.02
NEK9-211ENST00000557673 SNTB1Q13884 538 aaKnown RBP15.15■□□□□ 0.02
NEK9-211ENST00000557673 TIGD2Q4W5G0 525 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 BICRALQ6AI39 1079 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 NPSR1Q6W5P4 371 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 MSANTD1Q6ZTZ1 278 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 SZRD1Q7Z422 152 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 ANKRD46Q86W74 232 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 LACC1Q8IV20 430 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 PM20D2Q8IYS1 436 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 SFXN5Q8TD22 340 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 DIO2Q92813 273 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 GIMAP5Q96F15 307 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 JSRP1Q96MG2 331 aaPredicted RBP15.15■□□□□ 0.02
NEK9-211ENST00000557673 CCDC115Q96NT0 180 aa15.15■□□□□ 0.02
NEK9-211ENST00000557673 NSRP1Q9H0G5 558 aaKnown RBP15.15■□□□□ 0.02
NEK9-211ENST00000557673 RPH3AQ9Y2J0 694 aaPredicted RBP15.15■□□□□ 0.02
NEK9-211ENST00000557673 PRSS51A0A1B0GVH4 220 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 FRG2CA6NGY1 282 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 CAPN14A8MX76 684 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 TP53I11O14683 189 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 CFLARO15519 480 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 EMC8O43402 210 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 ERN1O75460 977 aaKnown RBP15.14■□□□□ 0.01
NEK9-211ENST00000557673 GOSR1O95249 250 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 IL6P05231 212 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 ABCB1P08183 1280 aaPredicted RBP15.14■□□□□ 0.01
NEK9-211ENST00000557673 NCF2P19878 526 aaPredicted RBP15.14■□□□□ 0.01
NEK9-211ENST00000557673 DRD4P21917 467 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 ABCD3P28288 659 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 CEACAM8P31997 349 aaPredicted RBP15.14■□□□□ 0.01
NEK9-211ENST00000557673 SOAT1P35610 550 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 POLR2JP52435 117 aaKnown RBP15.14■□□□□ 0.01
NEK9-211ENST00000557673 NRG3P56975 720 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 CORO7P57737 925 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 DCAF7P61962 342 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 PRR5P85299 388 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 GAB1Q13480 694 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 KEAP1Q14145 624 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 TBCELQ5QJ74 424 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 METTL21CQ5VZV1 264 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 PAMR1Q6UXH9 720 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 BIVMQ86UB2 503 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 OR4A15Q8NGL6 344 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 SPPL2AQ8TCT8 520 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 HOXB13Q92826 284 aaPredicted RBP15.14■□□□□ 0.01
NEK9-211ENST00000557673 HSPBAP1Q96EW2 488 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 LCORQ96JN0 433 aaPredicted RBP15.14■□□□□ 0.01
NEK9-211ENST00000557673 OR52E6Q96RD3 313 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 DOHHQ9BU89 302 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 C3orf14Q9HBI5 128 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 EQTNQ9NQ60 294 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 ZCCHC3Q9NUD5 404 aaKnown RBP15.14■□□□□ 0.01
NEK9-211ENST00000557673 TMEM45AQ9NWC5 275 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 BTNL2Q9UIR0 455 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 CBLCQ9ULV8 474 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 SNX8Q9Y5X2 465 aa15.14■□□□□ 0.01
NEK9-211ENST00000557673 FLNAP21333 2647 aaKnown RBP15.14■□□□□ 0.01
NEK9-211ENST00000557673 C15orf38-AP3S2A0A0A6YYH1 394 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 RNF103-CHMP3A0A140T963 221 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 ANKRD33BA6NCL7 494 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 TUBAL3A6NHL2 446 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 NR5A2O00482 541 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 ACOX3O15254 700 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms