RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 DOHHQ9BU89 302 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 TBL1XR1Q9BZK7 514 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 C1orf21Q9H246 121 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 EVA1AQ9H8M9 152 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 SPAG4Q9NPE6 437 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 ANKRD10Q9NXR5 420 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 KLRF1Q9NZS2 232 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 ABCD2Q9UBJ2 740 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 B4GALT7Q9UBV7 327 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 L3MBTL1Q9Y468 752 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 ZNF407Q9C0G0 2248 aa12.94□□□□□ -0.34
SUPT16H-208ENST00000557652 DSPPQ9NZW4 1301 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 PCNX3Q9H6A9 2034 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 CCT8L1PA6NM43 557 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 ACOT7O00154 380 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 PEX1O43933 1283 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 ICOSLGO75144 302 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 NME6O75414 186 aaPredicted RBP12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 PDE9AO76083 593 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 IGKV1D-16P01601 117 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 MSX1P28360 303 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 DCTP40126 519 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 RASSF2P50749 326 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 EEFSECP57772 596 aaKnown RBP12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 KCNJ2P63252 427 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 C17orf67Q0P5P2 114 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 VEZF1Q14119 521 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 CYP51A1Q16850 503 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 PLEKHN1Q494U1 663 aaPredicted RBP12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 FIGNL1Q6PIW4 674 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 FRRS1Q6ZNA5 592 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 KRT73Q86Y46 540 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 PEX5LQ8IYB4 626 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 HIPK4Q8NE63 616 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 TOR1AIP2Q8NFQ8 470 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 OR2M7Q8NG81 312 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 SLC38A5Q8WUX1 472 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 SLC35B4Q969S0 331 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 REXO5Q96IC2 774 aaKnown RBP12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 SPATA5L1Q9BVQ7 753 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 ARMC7Q9H6L4 198 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 ARL8BQ9NVJ2 186 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 ANGPT4Q9Y264 503 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 SLC35A3Q9Y2D2 325 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 IFT52Q9Y366 437 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 WIF1Q9Y5W5 379 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 KCNE3Q9Y6H6 103 aa12.93□□□□□ -0.34
SUPT16H-208ENST00000557652 IGLV3-32A0A0A0MS00 114 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 FAM220BPB1ANY3 271 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 SLC28A2O43868 658 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 TRIM3O75382 744 aaPredicted RBP12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 H6PDO95479 791 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 OXSR1O95747 527 aaPredicted RBP12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 DBIP07108 87 aaKnown RBP12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 THBS1P07996 1170 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 RFX3P48380 749 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 MASP1P48740 699 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 MTPNP58546 118 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 CDK6Q00534 326 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 FUT5Q11128 374 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 CAPRIN1Q14444 709 aaKnown RBP12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 GRAMD1BQ3KR37 738 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 NADK2Q4G0N4 442 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 KLHL26Q53HC5 615 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 TYW3Q6IPR3 259 aaKnown RBP12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 FAM180AQ6UWF9 173 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 SLC22A16Q86VW1 577 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 CALHM3Q86XJ0 350 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 SULF2Q8IWU5 870 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 OR5M3Q8NGP4 307 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 GRHL3Q8TE85 626 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 RASSF5Q8WWW0 418 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 NODALQ96S42 347 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 ZNF607Q96SK3 696 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 TREX2Q9BQ50 279 aaPredicted RBP12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 SLC38A1Q9H2H9 487 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 IKZF5Q9H5V7 419 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 ZFP64Q9NPA5 681 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 AGPAT4Q9NRZ5 378 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 MRPS18CQ9Y3D5 142 aaKnown RBP12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 DTNAQ9Y4J8 743 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 CSAG2Q9Y5P2 127 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 CHD6Q8TD26 2715 aa12.92□□□□□ -0.34
SUPT16H-208ENST00000557652 NBEAQ8NFP9 2946 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 PRORSD1PA6NEY8 169 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 AGAP5A6NIR3 686 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 SNPHO15079 494 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 NDUFB5O43674 189 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 SERPINB7O75635 380 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 F10P00742 488 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 BCHEP06276 602 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 RPS4Y1P22090 263 aaKnown RBP12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 PCGF2P35227 344 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 MEOX1P50221 254 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 GAS1P54826 345 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 SUMO3P55854 103 aaPredicted RBP12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 PSME3P61289 254 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 MXRA7P84157 204 aa12.91□□□□□ -0.34
SUPT16H-208ENST00000557652 SCARB2Q14108 478 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms