RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CYP27C1Q4G0S4 372 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 TPGS2Q68CL5 300 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 GTF3C1Q12789 2109 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 KLK1P06870 262 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 VAMP3Q15836 100 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 LY6KQ17RY6 165 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 PKDCCQ504Y2 493 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 HGSNATQ68CP4 663 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 METTL2BQ6P1Q9 378 aaKnown RBP8.4□□□□□ -1.06
SYNE3-205ENST00000557275 LRFN4Q6PJG9 635 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 LRRC25Q8N386 305 aaPredicted RBP8.4□□□□□ -1.06
SYNE3-205ENST00000557275 OR2T11Q8NH01 316 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 HCAR1Q9BXC0 346 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 MVB12BQ9H7P6 319 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 RAB18Q9NP72 206 aa8.4□□□□□ -1.06
SYNE3-205ENST00000557275 ADGRB1O14514 1584 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 ALKQ9UM73 1620 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 PDHXO00330 501 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 DVL1O14640 695 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 CH25HO95992 272 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 KDELR2P33947 212 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 DVL1P1P54792 670 aaPredicted RBP8.4□□□□□ -1.07
SYNE3-205ENST00000557275 RPS15AP62244 130 aaKnown RBP8.4□□□□□ -1.07
SYNE3-205ENST00000557275 TMEM18Q96B42 140 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 MCHR1Q99705 422 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 C14orf119Q9NWQ9 140 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 SMAD9O15198 467 aaKnown RBP8.4□□□□□ -1.07
SYNE3-205ENST00000557275 YY2O15391 372 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 RAB1AP62820 205 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 ERCC6L2Q5T890 1561 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 FAM180BQ6P0A1 224 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 ALG3Q92685 438 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 PRRC1Q96M27 445 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 MCOLN1Q9GZU1 580 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 PDE7BQ9NP56 450 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 SOX14O95416 240 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 ADAMTS16Q8TE57 1224 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 OR5P2Q8WZ92 322 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 MIB2Q96AX9 1013 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 LRR1Q96L50 414 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 DPEP3Q9H4B8 488 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 LIN7BQ9HAP6 207 aa8.4□□□□□ -1.07
SYNE3-205ENST00000557275 A0A1W2PQH9 124 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 FAM221BA6H8Z2 402 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 BANF1O75531 89 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 CDK4P11802 303 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 ADARB1P78563 741 aaKnown RBP8.39□□□□□ -1.07
SYNE3-205ENST00000557275 NFATC3Q12968 1075 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 SYT6Q5T7P8 510 aaPredicted RBP8.39□□□□□ -1.07
SYNE3-205ENST00000557275 ETV7Q9Y603 341 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 VWDEQ8N2E2 1590 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 IQCF5A8MTL0 148 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 STBD1O95210 358 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 CKMT2P17540 419 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 HNRNPA3P51991 378 aaKnown RBP8.39□□□□□ -1.07
SYNE3-205ENST00000557275 SIAH1Q8IUQ4 282 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 CD200R1Q8TD46 325 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 ZDHHC11Q9H8X9 412 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 NLKQ9UBE8 527 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 ZFC3H1O60293 1989 aaKnown RBP8.39□□□□□ -1.07
SYNE3-205ENST00000557275 CEBPZOSA8MTT3 80 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 ZNF587BE7ETH6 402 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 SMIM10L2AP0DMW4 78 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 SMIM10L2BP0DMW5 78 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 SELPLGQ14242 412 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 GRIK5Q16478 980 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 ODF4Q2M2E3 257 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 C9orf131Q5VYM1 1079 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 IRF2BP2Q7Z5L9 587 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 PPLO60437 1756 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 ZNF487B1APH4 448 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 EMC8O43402 210 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 EOMESO95936 686 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 HEXAP06865 529 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 BEX2Q9BXY8 128 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 BEX1Q9HBH7 125 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 DDX4Q9NQI0 724 aaKnown RBP8.39□□□□□ -1.07
SYNE3-205ENST00000557275 DZANK1Q9NVP4 752 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 MT-ND4P03905 459 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 APLNRP35414 380 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 TAF10Q12962 218 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 MEP1AQ16819 746 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 STEAP3Q658P3 488 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 GPR22Q99680 433 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 IL21RQ9HBE5 538 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 KLF15Q9UIH9 416 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 C1orf226A1L170 272 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 CD53P19397 219 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 ITGB8P26012 769 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 ADIPOR2Q86V24 386 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 WDR5BQ86VZ2 330 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 RIMS1Q86UR5 1692 aaKnown RBP8.39□□□□□ -1.07
SYNE3-205ENST00000557275 PCNX2A6NKB5 2137 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 METTL15A6NJ78 407 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 SUSD5O60279 629 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 RGS11O94810 467 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 TMEM71Q6P5X7 295 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 SBSNQ6UWP8 590 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 TIFABQ6ZNK6 161 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 USP50Q70EL3 339 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms