RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 TJP3O95049 919 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 LRATO95237 230 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 C8GP07360 202 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 ELANEP08246 267 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 CSF3P09919 207 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 RHOXF2BP0C7M4 288 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 ZNF708P17019 499 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 NAGAP17050 411 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 STIP1P31948 543 aaKnown RBP4.18□□□□□ -1.74
SCFD1-223ENST00000557076 HPDP32754 393 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-223ENST00000557076 PTPN7P35236 360 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 SRP14P37108 136 aaKnown RBP4.18□□□□□ -1.74
SCFD1-223ENST00000557076 GRIA1P42261 906 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 STT3AP46977 705 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 SLC37A1P57057 533 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 FBXW4P57775 412 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 ACTG1P63261 375 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 IRX1P78414 480 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-223ENST00000557076 IGLV3-21P80748 117 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-223ENST00000557076 GPS1Q13098 491 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 IQCB1Q15051 598 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 RBBP5Q15291 538 aaKnown RBP4.18□□□□□ -1.74
SCFD1-223ENST00000557076 RPS6KA2Q15349 733 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 CYP1B1Q16678 543 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 MST1LQ2TV78 715 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 TOR1AIP1Q5JTV8 583 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 AGAP6Q5VW22 663 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 SLC30A6Q6NXT4 461 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 ZNF793Q6ZN11 406 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 DEF8Q6ZN54 512 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 RBM43Q6ZSC3 357 aaKnown RBP4.18□□□□□ -1.74
SCFD1-223ENST00000557076 USP43Q70EL4 1123 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 SLC29A4Q7RTT9 530 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 ZNF572Q7Z3I7 529 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-223ENST00000557076 CTAGE6Q86UF2 777 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 GPSM1Q86YR5 675 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 FAM47BQ8NA70 645 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 CLRN3Q8NCR9 226 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 STEAP2Q8NFT2 490 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 SEMA6DQ8NFY4 1073 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 TTLQ8NG68 377 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 OR14L1PQ8NHC6 308 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 SLC35B2Q8TB61 432 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 HSD17B8Q92506 261 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 KCNJ9Q92806 393 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 NEIL2Q969S2 332 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 MS4A6EQ96DS6 147 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 FBXL20Q96IG2 436 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 SERINC2Q96SA4 455 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 AIF1LQ9BQI0 150 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 KIFC1Q9BW19 673 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 OSBPL8Q9BZF1 889 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 ACTR6Q9GZN1 396 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 WWTR1Q9GZV5 400 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 ACTR8Q9H981 624 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 PELI2Q9HAT8 420 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 GALNT9Q9HCQ5 603 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 LYRM4Q9HD34 91 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 ANO10Q9NW15 660 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 TEX10Q9NXF1 929 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-223ENST00000557076 TAS2R10Q9NYW0 307 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 SLC17A6Q9P2U8 582 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 INTUQ9ULD6 942 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 MED16Q9Y2X0 877 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 ZNF175Q9Y473 711 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 MAD1L1Q9Y6D9 718 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 PLCE1Q9P212 2302 aa4.18□□□□□ -1.74
SCFD1-223ENST00000557076 DPRXA6NFQ7 191 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 BTNL10A8MVZ5 291 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 VWC2LB2RUY7 222 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 CDC7O00311 574 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 CLOCKO15516 846 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 ERI3O43414 337 aaKnown RBP4.17□□□□□ -1.74
SCFD1-223ENST00000557076 LDB3O75112 727 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 ICOSLGO75144 302 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 VAPBO95292 243 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 AIFM1O95831 613 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 ALDOAP04075 364 aaKnown RBP4.17□□□□□ -1.74
SCFD1-223ENST00000557076 ABCB1P08183 1280 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-223ENST00000557076 HIST1H2AGP0C0S8 130 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-223ENST00000557076 CCDC166P0CW27 439 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 HIST1H2ADP20671 130 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 OGNP20774 298 aaKnown RBP4.17□□□□□ -1.74
SCFD1-223ENST00000557076 SAT1P21673 171 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 DPP4P27487 766 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 GSTM2P28161 218 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 SRD5A2P31213 254 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 HNRNPH1P31943 449 aaKnown RBP4.17□□□□□ -1.74
SCFD1-223ENST00000557076 GALNSP34059 522 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 DEKP35659 375 aaKnown RBP4.17□□□□□ -1.74
SCFD1-223ENST00000557076 FDFT1P37268 417 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 NR4A2P43354 598 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 NPY2RP49146 381 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 TMED10P49755 219 aaKnown RBP4.17□□□□□ -1.74
SCFD1-223ENST00000557076 EFNA4P52798 201 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 PLA2G16P53816 162 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 HADHBP55084 474 aaKnown RBP4.17□□□□□ -1.74
SCFD1-223ENST00000557076 LGALS4P56470 323 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 CLDN15P56746 228 aa4.17□□□□□ -1.74
SCFD1-223ENST00000557076 MRPS35P82673 323 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms