RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 MBD3L5A6NJ08 208 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-224ENST00000556737 CD8B2A6NJW9 211 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 TTC36A6NLP5 189 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 AHRRA9YTQ3 701 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 ZIC3O60481 467 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 ACTL6AO96019 429 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 LAMP1P11279 417 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 CPN1P15169 458 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 MAPK1P28482 360 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 GPC1P35052 558 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 TIMP3P35625 211 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 LHX2P50458 406 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 DLX5P56178 289 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 C21orf58P58505 322 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 MRPS22P82650 360 aaKnown RBP9.37□□□□□ -0.91
SHMT2-224ENST00000556737 DUSP5Q16690 384 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 DECR1Q16698 335 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 IL23RQ5VWK5 629 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 NSUN5P2Q63ZY6 315 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 APOOLQ6UXV4 268 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 R3HCC1LQ7Z5L2 792 aaKnown RBP9.37□□□□□ -0.91
SHMT2-224ENST00000556737 PIGWQ7Z7B1 504 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 ZAR1Q86SH2 424 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 IFNEQ86WN2 208 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 LURAP1LQ8IV03 231 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 DMRTC2Q8IXT2 367 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-224ENST00000556737 KRTCAP2Q8N6L1 136 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 FNDC5Q8NAU1 212 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 NUP43Q8NFH3 380 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 OR2M3Q8NG83 312 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 OR10Q1Q8NGQ4 319 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 OR14L1PQ8NHC6 308 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 MBD3L2Q8NHZ7 208 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-224ENST00000556737 C10orf82Q8WW14 230 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 FAM120BQ96EK7 910 aaKnown RBP9.37□□□□□ -0.91
SHMT2-224ENST00000556737 C14orf79Q96F83 325 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 OTUB1Q96FW1 271 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-224ENST00000556737 RMND5BQ96G75 393 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-224ENST00000556737 LURAP1Q96LR2 239 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 TUBA1CQ9BQE3 449 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 RUBCNLQ9H714 662 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 KCNJ16Q9NPI9 418 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 FAM120CQ9NX05 1096 aaKnown RBP9.37□□□□□ -0.91
SHMT2-224ENST00000556737 ALKBH4Q9NXW9 302 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 TAS2R10Q9NYW0 307 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 SH3BP4Q9P0V3 963 aa9.37□□□□□ -0.91
SHMT2-224ENST00000556737 ERICH4A6NGS2 130 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 HSPB2A8KAH6 182 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 FAM47E-STBD1D6RA91 191 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 EMC8O43402 210 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 UTS2O95399 124 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 G6PDP11413 515 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 ZNF708P17019 499 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 GABRA3P34903 492 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 RPL3P39023 403 aaKnown RBP9.36□□□□□ -0.91
SHMT2-224ENST00000556737 ZNF136P52737 540 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 PRKAG1P54619 331 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 MANFP55145 182 aaKnown RBP9.36□□□□□ -0.91
SHMT2-224ENST00000556737 CLDN18P56856 261 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 KRTAP10-9P60411 292 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 ZNHIT3Q15649 155 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-224ENST00000556737 HSPB2Q16082 182 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 SLC25A35Q3KQZ1 300 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 GRAMD1BQ3KR37 738 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 SLC9B1Q4ZJI4 515 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 ZNF771Q7L3S4 317 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-224ENST00000556737 CAMKMTQ7Z624 323 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 GALNT10Q86SR1 603 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 CDRT4Q8N9R6 151 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 C9orf106Q8NAJ2 232 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 SLC16A11Q8NCK7 471 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 PSMA8Q8TAA3 256 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 FAM110BQ8TC76 370 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 TUBGCP3Q96CW5 907 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 COQ8BQ96D53 544 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 C16orf58Q96GQ5 468 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 TRIB1Q96RU8 372 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 EBF4Q9BQW3 602 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 WDR55Q9H6Y2 383 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-224ENST00000556737 CXorf36Q9H7Y0 433 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 TCF7L2Q9NQB0 619 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 PPP4R1LQ9P1A2 415 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 CLCF1Q9UBD9 225 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 DKKL1Q9UK85 242 aa9.36□□□□□ -0.91
SHMT2-224ENST00000556737 MRPS18CQ9Y3D5 142 aaKnown RBP9.36□□□□□ -0.91
SHMT2-224ENST00000556737 POLQO75417 2590 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 IGLV3-32A0A0A0MS00 114 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 A0A1W2PRB8 838 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 E9PBE3 544 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 EBAG9O00559 213 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 HCRTR2O43614 444 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 DCTN3O75935 186 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 KCNK2O95069 426 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 KCNH1O95259 989 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 C6orf47O95873 294 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 NGFRP08138 427 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 NCF2P19878 526 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-224ENST00000556737 TCEA1P23193 301 aaKnown RBP9.35□□□□□ -0.91
SHMT2-224ENST00000556737 DPP4P27487 766 aa9.35□□□□□ -0.91
SHMT2-224ENST00000556737 EPHA3P29320 983 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms