RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 C1orf109Q9NX04 203 aa6.99□□□□□ -1.29
HNRNPC-226ENST00000556628 TAS2R7Q9NYW3 318 aa6.99□□□□□ -1.29
HNRNPC-226ENST00000556628 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.99□□□□□ -1.29
HNRNPC-226ENST00000556628 PPP4R1LQ9P1A2 415 aa6.99□□□□□ -1.29
HNRNPC-226ENST00000556628 CBLCQ9ULV8 474 aa6.99□□□□□ -1.29
HNRNPC-226ENST00000556628 C19orf53Q9UNZ5 99 aaPredicted RBP6.99□□□□□ -1.29
HNRNPC-226ENST00000556628 MRPS18CQ9Y3D5 142 aaKnown RBP6.99□□□□□ -1.29
HNRNPC-226ENST00000556628 L3MBTL1Q9Y468 752 aa6.99□□□□□ -1.29
HNRNPC-226ENST00000556628 INTS1Q8N201 2190 aaKnown RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 CENPEQ02224 2701 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 SCO2O43819 266 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 NME6O75414 186 aaPredicted RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 IL18BPO95998 194 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 IFI6P09912 130 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 PRPS2P11908 318 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 PEPDP12955 493 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 CD1EP15812 388 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 VAMP1P23763 118 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 PRPH2P23942 346 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 CHMP24386 653 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 GRK2P25098 689 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 EVI2BP34910 448 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 ASMTP46597 345 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 CPA2P48052 419 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 RFX3P48380 749 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 AGFG1P52594 562 aaKnown RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 ZNF136P52737 540 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 SLC18A1P54219 525 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 PRKAG1P54619 331 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 DIO3P55073 304 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 MANFP55145 182 aaKnown RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 DLX5P56178 289 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 DSCR4P56555 118 aaPredicted RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 EEFSECP57772 596 aaKnown RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 GNGT1P63211 74 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 EEF1A1P68104 462 aaKnown RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 PSG6Q00889 435 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 SLC18A2Q05940 514 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 HSPB3Q12988 150 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 GAB1Q13480 694 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 PCLAFQ15004 111 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 FBXL19-AS1Q494R0 122 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 GALNTL6Q49A17 601 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 VPS26BQ4G0F5 336 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 FLYWCH1Q4VC44 716 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 DCST1Q5T197 706 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 EEF1A1P5Q5VTE0 462 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 OR5M10Q6IEU7 315 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 SZRD1Q7Z422 152 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 EXOC3L1Q86VI1 746 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 GRAMD2AQ8IUY3 354 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 C10orf107Q8IVU9 208 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 DDIASQ8IXT1 998 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 ZZZ3Q8IYH5 903 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 NAXEQ8NCW5 288 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 OR4N2Q8NGD1 307 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 CEP70Q8NHQ1 597 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 FAM222BQ8WU58 562 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 GFM2Q969S9 779 aaKnown RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 PPCDCQ96CD2 204 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 ELP4Q96EB1 424 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 ZBED6CLQ96FA7 236 aaPredicted RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 APOPT1Q96IL0 206 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 AMDHD1Q96NU7 426 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 CCT7Q99832 543 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 TUBA1CQ9BQE3 449 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 GPATCH1Q9BRR8 931 aaKnown RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 SFXN3Q9BWM7 321 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 GATA5Q9BWX5 397 aaPredicted RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 POLDIP3Q9BY77 421 aaKnown RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 TBL1XR1Q9BZK7 514 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 C12orf65Q9H3J6 166 aaKnown RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 REEP4Q9H6H4 257 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 HHATLQ9HCP6 504 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 MKS1Q9NXB0 559 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 SH3BP4Q9P0V3 963 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 FBXL2Q9UKC9 423 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 ABCG2Q9UNQ0 655 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 RPH3AQ9Y2J0 694 aaPredicted RBP6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 TMED5Q9Y3A6 229 aa6.98□□□□□ -1.29
HNRNPC-226ENST00000556628 TUBAL3A6NHL2 446 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 CLCA1A8K7I4 914 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 KDM4EB2RXH2 506 aaPredicted RBP6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 TMEM114B3SHH9 223 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 NPIPB8E9PQR5 432 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 LINC01387J3KSC0 135 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 UPK1AO00322 258 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 AKAP10O43572 662 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 NPHS1O60500 1241 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 RCBTB2O95199 551 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 IL33O95760 270 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 LINC00032P0C843 101 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 HK1P19367 917 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 TCEA1P23193 301 aaKnown RBP6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 TACR1P25103 407 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 GABRA3P34903 492 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 HPCAL1P37235 193 aa6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 RPL3P39023 403 aaKnown RBP6.97□□□□□ -1.29
HNRNPC-226ENST00000556628 STARP49675 285 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms