RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TEX38Q6PEX7 206 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 PODNL1Q6PEZ8 512 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 FAM151BQ6UXP7 276 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 TMEM184AQ6ZMB5 413 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 DPPA4Q7L190 304 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 PRSS45Q7RTY3 260 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 LRRC70Q7Z2Q7 622 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 TSPAN33Q86UF1 283 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 GPAT4Q86UL3 456 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 PIM3Q86V86 326 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 GLCCI1Q86VQ1 547 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 ZNF595Q8IYB9 648 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 PIANPQ8IYJ0 282 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 SPATA6LQ8N4H0 392 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 KIF2BQ8N4N8 673 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 TRAM1L1Q8N609 369 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 ZBTB2Q8N680 514 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 BHLHE23Q8NDY6 225 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 OR2A12Q8NGT7 310 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 EEF1AKMT1Q8WVE0 214 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 ING5Q8WYH8 240 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 RRNAD1Q96FB5 475 aaKnown RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 LINGO1Q96FE5 620 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 TMEM68Q96MH6 324 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 QRFPRQ96P65 431 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 PIGQQ9BRB3 760 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 SCNM1Q9BWG6 230 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 CADM1Q9BY67 442 aaKnown RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 NUF2Q9BZD4 464 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 LINC00597Q9H2U6 94 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 EFCAB1Q9HAE3 211 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 ZFP14Q9HCL3 533 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 TRIM36Q9NQ86 728 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 DYRK4Q9NR20 520 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 ELOVL2Q9NXB9 296 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 ARMCX1Q9P291 453 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 DEC1Q9P2X7 70 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 NKX1-2Q9UD57 310 aaPredicted RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 UBQLN2Q9UHD9 624 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 CLEC4EQ9ULY5 219 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 MRPS2Q9Y399 296 aaKnown RBP4.78□□□□□ -1.64
SRP54-211ENST00000556445 OARD1Q9Y530 152 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 UTRNP46939 3433 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 NOTCH4Q99466 2003 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 SCN8AQ9UQD0 1980 aa4.78□□□□□ -1.64
SRP54-211ENST00000556445 DOCK6Q96HP0 2047 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 GSAPA4D1B5 854 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 NEMP2A6NFY4 417 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 HEPACAM2A8MVW5 462 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 NPIPB11E5RHQ5 1161 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 E9PI62 339 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 SDHDO14521 159 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 GAPDHSO14556 408 aaPredicted RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 SMAD9O15198 467 aaKnown RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 OGG1O15527 345 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 SEC14L5O43304 696 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 TLX2O43763 284 aaPredicted RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 LANCL1O43813 399 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 OR1I1O60431 355 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 NIPSNAP2O75323 286 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 ECI2O75521 394 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 CDK14O94921 469 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 GLCEO94923 617 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 TSPAN12O95859 305 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 OTCP00480 354 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 TFP02787 698 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 F7P08709 466 aaPredicted RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 ANXA5P08758 320 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 HIST1H2AGP0C0S8 130 aaPredicted RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 CISD3P0C7P0 127 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 UBTFL6P0CB48 400 aaPredicted RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 STAG3L3P0CL85 134 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 G6PDP11413 515 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 APEHP13798 732 aaKnown RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 ATP1B2P14415 290 aaPredicted RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 IDO1P14902 403 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 ZNF182P17025 639 aaPredicted RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 LBPP18428 481 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 MSH3P20585 1137 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 HIST1H2ADP20671 130 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 BMI1P35226 326 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 MRPL19P49406 292 aaKnown RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 MTTPP55157 894 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 AP1S2P56377 157 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 NTHL1P78549 312 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 ZNF33BQ06732 778 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 ART3Q13508 389 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 CUL3Q13618 768 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 ELAVL3Q14576 367 aaKnown RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 DAZAP2Q15038 168 aaPredicted RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 SHBQ15464 509 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 TGFBIQ15582 683 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 OR4D1Q15615 310 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 CHRNA6Q15825 494 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 CCDC6Q16204 474 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 RBBP7Q16576 425 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 HIST2H2ACQ16777 129 aaPredicted RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 ST3GAL2Q16842 350 aa4.77□□□□□ -1.65
SRP54-211ENST00000556445 HNRNPA1L2Q32P51 320 aaKnown RBP4.77□□□□□ -1.65
SRP54-211ENST00000556445 LRIT3Q3SXY7 679 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms